Variant report

Variant	rs4951429
Chromosome Location	chr1:211988281-211988282
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:211982593..211984872-chr1:211986745..211989061,2	K562	blood:
2	chr1:211984186..211988892-chr1:211994677..211996452,5	K562	blood:

Extended variants
information (count: 66 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:66)

rs_ID	r²[population]
rs10863927	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11119809	1.00[AFR][1000 genomes]
rs11119818	1.00[EUR][1000 genomes]
rs11119819	1.00[EUR][1000 genomes]
rs1418047	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1539196	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2000168	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2050953	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2105322	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2788128	0.82[EUR][1000 genomes]
rs2788129	0.82[EUR][1000 genomes]
rs2788130	0.82[EUR][1000 genomes]
rs2788131	0.82[EUR][1000 genomes]
rs2788135	0.82[EUR][1000 genomes]
rs2788136	0.82[EUR][1000 genomes]
rs2788137	0.82[EUR][1000 genomes]
rs2788141	0.91[EUR][1000 genomes]
rs2788142	0.91[EUR][1000 genomes]
rs2788144	0.91[EUR][1000 genomes]
rs2788146	0.91[EUR][1000 genomes]
rs2808376	0.91[EUR][1000 genomes]
rs2808377	0.91[EUR][1000 genomes]
rs2808380	0.82[EUR][1000 genomes]
rs2808383	0.91[EUR][1000 genomes]
rs2808384	0.82[EUR][1000 genomes]
rs2808387	0.82[EUR][1000 genomes]
rs2808390	0.82[EUR][1000 genomes]
rs28475044	1.00[EUR][1000 genomes]
rs28801990	0.87[EUR][1000 genomes]
rs28851183	1.00[EUR][1000 genomes]
rs2970573	0.82[EUR][1000 genomes]
rs2970574	0.82[EUR][1000 genomes]
rs2970575	0.82[EUR][1000 genomes]
rs2970576	0.91[EUR][1000 genomes]
rs2970581	0.91[EUR][1000 genomes]
rs2993540	0.82[EUR][1000 genomes]
rs2993542	0.82[EUR][1000 genomes]
rs2993543	0.91[EUR][1000 genomes]
rs3010008	0.82[EUR][1000 genomes]
rs4245744	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4508084	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4579825	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4951424	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4951427	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4951430	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4951432	1.00[EUR][1000 genomes]
rs4951547	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4951549	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs60146950	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6540707	1.00[AFR][1000 genomes]
rs6540710	1.00[EUR][1000 genomes]
rs6656780	1.00[AFR][1000 genomes]
rs6664386	0.89[EUR][1000 genomes]
rs6669803	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6672393	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6685282	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6689342	1.00[EUR][1000 genomes]
rs6692119	0.83[EUR][1000 genomes]
rs6693275	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6697341	1.00[EUR][1000 genomes]
rs6699292	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6699981	1.00[EUR][1000 genomes]
rs7413558	1.00[EUR][1000 genomes]
rs7517565	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7545377	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7553567	0.92[EUR][1000 genomes]

No data

Chromatin state (count:105 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211915800-211991800	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr1:211916800-211994200	Weak transcription	Fetal Brain Male	brain
3	chr1:211919200-212001200	Weak transcription	Gastric	stomach
4	chr1:211923000-211991800	Weak transcription	HSMM	muscle
5	chr1:211924000-212002400	Weak transcription	NHLF	lung
6	chr1:211938200-211999400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr1:211939600-211992600	Weak transcription	Esophagus	oesophagus
8	chr1:211939800-212002400	Weak transcription	HSMMtube	muscle
9	chr1:211940000-212000600	Weak transcription	Rectal Smooth Muscle	rectum
10	chr1:211947400-212002400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr1:211951400-211992600	Weak transcription	Ovary	ovary
12	chr1:211952200-212003000	Weak transcription	Placenta Amnion	Placenta Amnion
13	chr1:211957600-211998800	Weak transcription	NHDF-Ad	bronchial
14	chr1:211957600-212000800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
15	chr1:211961200-212002200	Weak transcription	Primary T helper cells PMA-I stimulated	--
16	chr1:211965800-211992600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr1:211965800-212002200	Weak transcription	Primary T cells from cord blood	blood
18	chr1:211966400-211997400	Weak transcription	Sigmoid Colon	Sigmoid Colon
19	chr1:211966400-212002400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr1:211966600-211988800	Weak transcription	Lung	lung
21	chr1:211966600-211992600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr1:211966600-211997400	Weak transcription	Spleen	Spleen
23	chr1:211967000-211998800	Weak transcription	Osteobl	bone
24	chr1:211970000-211988800	Weak transcription	Adipose Nuclei	Adipose
25	chr1:211970800-211990600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr1:211971800-212002400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
27	chr1:211974000-212001200	Weak transcription	Small Intestine	intestine
28	chr1:211975200-211992000	Weak transcription	Primary T cells fromperipheralblood	blood
29	chr1:211976800-211991400	Weak transcription	Dnd41	blood
30	chr1:211976800-211997000	Weak transcription	Fetal Kidney	kidney
31	chr1:211979400-211989400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr1:211979400-212000600	Weak transcription	Aorta	Aorta
33	chr1:211981200-211997200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr1:211982200-211989600	Strong transcription	Fetal Intestine Large	intestine
35	chr1:211982600-211992400	Weak transcription	Fetal Stomach	stomach
36	chr1:211983000-211989800	Strong transcription	Primary B cells from peripheral blood	blood
37	chr1:211983000-212002400	Weak transcription	HUES6 Cell Line	embryonic stem cell
38	chr1:211983200-212002400	Weak transcription	Thymus	Thymus
39	chr1:211984600-212002400	Weak transcription	NH-A	brain
40	chr1:211984800-212002000	Weak transcription	HUVEC	blood vessel
41	chr1:211984800-212002400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
42	chr1:211985000-211990600	Genic enhancers	Primary B cells from cord blood	blood
43	chr1:211985000-211991800	Weak transcription	Duodenum Mucosa	Duodenum
44	chr1:211985600-211991600	Weak transcription	Rectal Mucosa Donor 31	rectum
45	chr1:211986200-211988400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
46	chr1:211986200-211988800	Weak transcription	A549	lung
47	chr1:211986200-211991600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr1:211986200-211992600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
49	chr1:211986200-211992600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr1:211986200-212000600	Weak transcription	HepG2	liver

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