The 2.0 version of rSNPBase

Variant report

Variant rs2050953
Chromosome Location chr1:211938066-211938067
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211909400-211939200 Weak transcription Ovary ovary
2 chr1:211909600-211939400 Weak transcription Esophagus oesophagus
3 chr1:211912600-211964600 Weak transcription NHEK skin
4 chr1:211912800-211970200 Weak transcription HMEC breast
5 chr1:211913800-211967800 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:211913800-211968800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:211913800-211969600 Weak transcription Small Intestine intestine
8 chr1:211914000-211949600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:211914000-211960400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr1:211914000-211965400 Weak transcription Thymus Thymus
11 chr1:211914000-211973600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:211914200-211947600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:211915800-211991800 Weak transcription Muscle Satellite Cultured Cells --
14 chr1:211916200-211965400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:211916800-211994200 Weak transcription Fetal Brain Male brain
16 chr1:211917000-211970400 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr1:211919200-212001200 Weak transcription Gastric stomach
18 chr1:211922600-211965600 Weak transcription Osteobl bone
19 chr1:211922800-211939200 Weak transcription HSMMtube muscle
20 chr1:211922800-211956200 Weak transcription HUVEC blood vessel
21 chr1:211922800-211963000 Weak transcription Hela-S3 cervix
22 chr1:211922800-211964800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr1:211922800-211965400 Weak transcription Right Ventricle heart
24 chr1:211923000-211939200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:211923000-211939200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr1:211923000-211951800 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:211923000-211967200 Weak transcription Colonic Mucosa Colon
28 chr1:211923000-211991800 Weak transcription HSMM muscle
29 chr1:211923200-211939200 Weak transcription Fetal Stomach stomach
30 chr1:211923200-211963400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:211923200-211967200 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr1:211923400-211950400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr1:211923800-211939200 Weak transcription Rectal Smooth Muscle rectum
34 chr1:211923800-211939400 Weak transcription Aorta Aorta
35 chr1:211923800-211950000 Weak transcription Placenta Placenta
36 chr1:211923800-211960600 Weak transcription Psoas Muscle Psoas
37 chr1:211924000-211939200 Weak transcription Pancreas Pancrea
38 chr1:211924000-211950600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:211924000-212002400 Weak transcription NHLF lung
40 chr1:211924200-211938800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:211924200-211939200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr1:211924200-211939200 Weak transcription Lung lung
43 chr1:211924200-211949600 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr1:211924200-211949800 Weak transcription Primary T cells from cord blood blood
45 chr1:211924200-211950600 Weak transcription Primary T cells fromperipheralblood blood
46 chr1:211924200-211960600 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr1:211924400-211939200 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr1:211924400-211939400 Weak transcription Stomach Smooth Muscle stomach
49 chr1:211924400-211949600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:211924400-211957400 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015