Variant report

Variant	rs4508084
Chromosome Location	chr1:212015532-212015533
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 80 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:80)

rs_ID	r²[population]
rs10863927	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11119818	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11119819	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs1418047	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1539196	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2000168	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2050953	0.85[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2105322	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2788128	0.82[EUR][1000 genomes]
rs2788129	0.82[EUR][1000 genomes]
rs2788130	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs2788131	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs2788135	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs2788136	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs2788137	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs2788141	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs2788142	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs2788144	0.91[EUR][1000 genomes]
rs2788146	0.91[EUR][1000 genomes]
rs2808376	0.91[EUR][1000 genomes]
rs2808377	0.91[EUR][1000 genomes]
rs2808380	0.82[EUR][1000 genomes]
rs2808383	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs2808384	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs2808387	0.82[EUR][1000 genomes]
rs2808390	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs28475044	1.00[EUR][1000 genomes]
rs28801990	0.87[EUR][1000 genomes]
rs28851183	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2970573	0.82[EUR][1000 genomes]
rs2970574	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs2970575	0.82[EUR][1000 genomes]
rs2970576	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs2970581	0.91[EUR][1000 genomes]
rs2970585	1.00[CEU][hapmap]
rs2970586	1.00[CEU][hapmap]
rs2970600	1.00[CEU][hapmap]
rs2970602	1.00[CEU][hapmap]
rs2993524	1.00[CEU][hapmap]
rs2993525	1.00[CEU][hapmap]
rs2993527	1.00[CEU][hapmap]
rs2993536	1.00[CEU][hapmap]
rs2993540	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs2993542	0.82[EUR][1000 genomes]
rs2993543	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs3009986	1.00[CEU][hapmap]
rs3009992	1.00[CEU][hapmap]
rs3009993	1.00[CEU][hapmap]
rs3009994	1.00[CEU][hapmap]
rs3009996	1.00[CEU][hapmap]
rs3009999	1.00[CEU][hapmap]
rs3010000	1.00[CEU][hapmap]
rs3010001	1.00[CEU][hapmap]
rs3010005	1.00[CEU][hapmap]
rs3010008	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs4245744	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4579825	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4951424	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4951427	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4951429	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4951430	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4951432	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs4951547	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4951549	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs60146950	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6540710	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6664386	0.89[EUR][1000 genomes]
rs6669803	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6672393	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6685282	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6689342	1.00[EUR][1000 genomes]
rs6692119	0.83[EUR][1000 genomes]
rs6693275	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6697341	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6699292	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6699981	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7413558	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7517565	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7545377	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7553567	0.92[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:212013200-212015800	Weak transcription	GM12878-XiMat	blood
2	chr1:212015000-212017200	Enhancers	Primary T helper cells PMA-I stimulated	--
3	chr1:212015200-212016400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
4	chr1:212015200-212016400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
5	chr1:212015400-212016400	Enhancers	Primary T killer memory cells from peripheral blood	blood
6	chr1:212015400-212017000	Enhancers	Dnd41	blood
7	chr1:212015400-212017200	Enhancers	Primary T helper cells fromperipheralblood	blood

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