The 2.0 version of rSNPBase

Variant report

Variant rs2970586
Chromosome Location chr1:212198620-212198621
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212112800-212202000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:212129400-212204000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr1:212133800-212208000 Weak transcription Gastric stomach
4 chr1:212134000-212207600 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr1:212134000-212207800 Weak transcription Colonic Mucosa Colon
6 chr1:212136600-212204000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr1:212148800-212207600 Weak transcription Rectal Smooth Muscle rectum
8 chr1:212149200-212199800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:212152800-212201600 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:212153400-212203600 Weak transcription Psoas Muscle Psoas
11 chr1:212153600-212202600 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:212160200-212199800 Weak transcription Brain Substantia Nigra brain
13 chr1:212160200-212202600 Weak transcription Muscle Satellite Cultured Cells --
14 chr1:212170400-212202600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr1:212170800-212199200 Weak transcription Pancreas Pancrea
16 chr1:212170800-212207800 Weak transcription Right Ventricle heart
17 chr1:212171000-212199800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:212171200-212208000 Weak transcription Esophagus oesophagus
19 chr1:212171200-212208000 Weak transcription Lung lung
20 chr1:212171600-212207400 Weak transcription Fetal Stomach stomach
21 chr1:212171800-212207600 Weak transcription Stomach Smooth Muscle stomach
22 chr1:212172200-212199800 Weak transcription Stomach Mucosa stomach
23 chr1:212173000-212204200 Weak transcription Fetal Heart heart
24 chr1:212180400-212206800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr1:212180800-212204000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:212182200-212205000 Weak transcription Thymus Thymus
27 chr1:212183200-212200400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:212183200-212202600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:212183600-212199800 Weak transcription Brain Hippocampus Middle brain
30 chr1:212186000-212199800 Weak transcription HepG2 liver
31 chr1:212187400-212199600 Weak transcription Liver Liver
32 chr1:212188400-212202400 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr1:212188400-212202400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:212188400-212204800 Weak transcription Fetal Intestine Small intestine
35 chr1:212188600-212203800 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr1:212188600-212204200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr1:212188600-212206800 Weak transcription Fetal Intestine Large intestine
38 chr1:212190000-212202600 Weak transcription NH-A brain
39 chr1:212190200-212203800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:212190200-212203800 Weak transcription NHDF-Ad bronchial
41 chr1:212190200-212207800 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr1:212190400-212200600 Weak transcription Osteobl bone
43 chr1:212190400-212202600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr1:212190400-212204200 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:212190400-212204600 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr1:212190400-212207800 Weak transcription Fetal Muscle Trunk muscle
47 chr1:212190600-212199200 Weak transcription HSMM muscle
48 chr1:212191000-212204000 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr1:212192200-212208000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:212194000-212201200 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015