Variant report
| Variant | rs6660399 |
|---|---|
| Chromosome Location | chr1:212020025-212020026 |
| allele | A/G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:56)
| rs_ID | r2[population] |
|---|---|
| rs2788128 | 1.00[AMR][1000 genomes] |
| rs2788129 | 1.00[AMR][1000 genomes] |
| rs2788130 | 1.00[MEX][hapmap];1.00[AMR][1000 genomes] |
| rs2788131 | 1.00[AMR][1000 genomes] |
| rs2788134 | 1.00[AMR][1000 genomes] |
| rs2788135 | 1.00[MEX][hapmap] |
| rs2788136 | 1.00[AMR][1000 genomes] |
| rs2788137 | 1.00[MEX][hapmap];1.00[AMR][1000 genomes] |
| rs2788141 | 1.00[MEX][hapmap] |
| rs2808384 | 1.00[AMR][1000 genomes] |
| rs2808387 | 1.00[AMR][1000 genomes] |
| rs2808390 | 1.00[AMR][1000 genomes] |
| rs2970573 | 1.00[AMR][1000 genomes] |
| rs2970574 | 1.00[AMR][1000 genomes] |
| rs2970575 | 1.00[AMR][1000 genomes] |
| rs2970585 | 1.00[AMR][1000 genomes] |
| rs2970586 | 1.00[MEX][hapmap];1.00[AMR][1000 genomes] |
| rs2970588 | 1.00[AMR][1000 genomes] |
| rs2970590 | 1.00[AMR][1000 genomes] |
| rs2970591 | 1.00[AMR][1000 genomes] |
| rs2970594 | 1.00[AMR][1000 genomes] |
| rs2970600 | 1.00[AMR][1000 genomes] |
| rs2970602 | 1.00[AMR][1000 genomes] |
| rs2993524 | 1.00[AMR][1000 genomes] |
| rs2993525 | 1.00[AMR][1000 genomes] |
| rs2993526 | 1.00[AMR][1000 genomes] |
| rs2993527 | 1.00[AMR][1000 genomes] |
| rs2993530 | 1.00[AMR][1000 genomes] |
| rs2993536 | 1.00[AMR][1000 genomes] |
| rs2993537 | 1.00[AMR][1000 genomes] |
| rs2993540 | 1.00[MEX][hapmap];1.00[AMR][1000 genomes] |
| rs2993542 | 1.00[AMR][1000 genomes] |
| rs2993546 | 1.00[AMR][1000 genomes] |
| rs2993548 | 1.00[AMR][1000 genomes] |
| rs2993549 | 1.00[AMR][1000 genomes] |
| rs3009983 | 1.00[AMR][1000 genomes] |
| rs3009986 | 1.00[AMR][1000 genomes] |
| rs3009990 | 1.00[AMR][1000 genomes] |
| rs3009992 | 1.00[AMR][1000 genomes] |
| rs3009993 | 1.00[AMR][1000 genomes] |
| rs3009994 | 1.00[MEX][hapmap];1.00[AMR][1000 genomes] |
| rs3009995 | 1.00[AMR][1000 genomes] |
| rs3009996 | 1.00[AMR][1000 genomes] |
| rs3009998 | 1.00[AMR][1000 genomes] |
| rs3009999 | 1.00[AMR][1000 genomes] |
| rs3010000 | 1.00[AMR][1000 genomes] |
| rs3010001 | 1.00[AMR][1000 genomes] |
| rs3010008 | 1.00[MEX][hapmap];1.00[AMR][1000 genomes] |
| rs3010014 | 1.00[AMR][1000 genomes] |
| rs3010015 | 1.00[AMR][1000 genomes] |
| rs3010017 | 1.00[AMR][1000 genomes] |
| rs3010018 | 1.00[AMR][1000 genomes] |
| rs3010019 | 1.00[AMR][1000 genomes] |
| rs3010020 | 1.00[AMR][1000 genomes] |
| rs3010021 | 1.00[AMR][1000 genomes] |
| rs3010022 | 1.00[MEX][hapmap];1.00[AMR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:212016800-212027000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
