The 2.0 version of rSNPBase

Variant report

Variant rs2808387
Chromosome Location chr1:212121008-212121009
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212103000-212132600 Weak transcription Gastric stomach
2 chr1:212103600-212132200 Weak transcription Esophagus oesophagus
3 chr1:212103800-212132200 Weak transcription NHLF lung
4 chr1:212104800-212124400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:212106200-212148600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:212106400-212132400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:212106400-212132600 Weak transcription Right Ventricle heart
8 chr1:212106400-212147800 Weak transcription NH-A brain
9 chr1:212107000-212132800 Weak transcription Pancreas Pancrea
10 chr1:212108000-212132400 Weak transcription Spleen Spleen
11 chr1:212109200-212132800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:212112000-212132200 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr1:212112000-212170200 Weak transcription Small Intestine intestine
14 chr1:212112200-212124600 Weak transcription Aorta Aorta
15 chr1:212112400-212132200 Weak transcription Rectal Smooth Muscle rectum
16 chr1:212112400-212132800 Weak transcription Brain Inferior Temporal Lobe brain
17 chr1:212112400-212133000 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr1:212112400-212148600 Weak transcription NHDF-Ad bronchial
19 chr1:212112600-212132200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:212112600-212133600 Weak transcription Brain Hippocampus Middle brain
21 chr1:212112600-212148200 Weak transcription Colon Smooth Muscle Colon
22 chr1:212112800-212202000 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr1:212113400-212122400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:212113400-212126600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:212113600-212122600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr1:212113600-212122600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr1:212113600-212125000 Weak transcription Brain Anterior Caudate brain
28 chr1:212113600-212138600 Weak transcription Fetal Kidney kidney
29 chr1:212113600-212151600 Weak transcription Psoas Muscle Psoas
30 chr1:212113600-212170200 Weak transcription Fetal Brain Male brain
31 chr1:212113800-212122800 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr1:212114200-212185800 Weak transcription Brain Angular Gyrus brain
33 chr1:212114400-212123000 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr1:212115400-212138800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr1:212115600-212125000 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:212115800-212124800 Weak transcription Lung lung
37 chr1:212115800-212124800 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr1:212115800-212132200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:212115800-212132400 Weak transcription Brain Substantia Nigra brain
40 chr1:212115800-212132600 Weak transcription Placenta Placenta
41 chr1:212115800-212144000 Weak transcription Adipose Nuclei Adipose
42 chr1:212115800-212151600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:212116400-212124400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr1:212116800-212122200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr1:212116800-212125200 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:212117000-212139600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:212117200-212124000 Weak transcription Duodenum Mucosa Duodenum
48 chr1:212117800-212123000 Weak transcription Primary B cells from peripheral blood blood
49 chr1:212117800-212132600 Weak transcription Left Ventricle heart
50 chr1:212118000-212125000 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015