The 2.0 version of rSNPBase

Variant report

Variant rs2993549
Chromosome Location chr1:212215830-212215831
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212209400-212217800 Weak transcription Small Intestine intestine
2 chr1:212209600-212226600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:212209600-212253000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:212210400-212223600 Weak transcription HSMM muscle
5 chr1:212210400-212227400 Weak transcription Fetal Muscle Trunk muscle
6 chr1:212210400-212228800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:212210400-212228800 Weak transcription Duodenum Mucosa Duodenum
8 chr1:212210400-212228800 Weak transcription Fetal Intestine Large intestine
9 chr1:212210600-212227400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:212210600-212229200 Weak transcription Fetal Brain Female brain
11 chr1:212210800-212216800 Weak transcription Fetal Intestine Small intestine
12 chr1:212210800-212217400 Weak transcription Fetal Muscle Leg muscle
13 chr1:212210800-212220800 Weak transcription Fetal Stomach stomach
14 chr1:212210800-212241200 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr1:212211000-212218200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:212211000-212227200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr1:212211400-212224000 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:212211400-212226600 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr1:212211400-212229200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:212211600-212218200 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:212211600-212218200 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr1:212211600-212227400 Weak transcription Fetal Lung lung
23 chr1:212211800-212218200 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr1:212211800-212223600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:212212000-212219200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:212212000-212220600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:212212000-212223000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:212212000-212228400 Weak transcription Brain Germinal Matrix brain
29 chr1:212212000-212229200 Weak transcription Fetal Kidney kidney
30 chr1:212213000-212227000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:212213200-212216200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:212214200-212216600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:212214200-212216800 Weak transcription H1 Cell Line embryonic stem cell
34 chr1:212214200-212222600 Weak transcription Primary hematopoietic stem cells blood
35 chr1:212214400-212216200 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr1:212214400-212219000 Weak transcription NHDF-Ad bronchial
37 chr1:212214400-212227200 Weak transcription NHEK skin
38 chr1:212214400-212228000 Weak transcription NH-A brain
39 chr1:212214400-212228200 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr1:212214400-212278000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr1:212214600-212216000 Weak transcription Fetal Thymus thymus
42 chr1:212214600-212216200 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr1:212214600-212216800 Weak transcription Primary monocytes fromperipheralblood blood
44 chr1:212214600-212217000 Genic enhancers Dnd41 blood
45 chr1:212214600-212217800 Weak transcription A549 lung
46 chr1:212214600-212218200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:212214600-212218200 Weak transcription HMEC breast
48 chr1:212214600-212218200 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr1:212214600-212218400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:212214600-212218800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015