The 2.0 version of rSNPBase

Variant report

Variant rs2993527
Chromosome Location chr1:212196566-212196567
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212112800-212202000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:212123800-212198200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:212129400-212204000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:212133800-212208000 Weak transcription Gastric stomach
5 chr1:212134000-212207600 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:212134000-212207800 Weak transcription Colonic Mucosa Colon
7 chr1:212136600-212204000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr1:212148800-212207600 Weak transcription Rectal Smooth Muscle rectum
9 chr1:212149200-212199800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr1:212152800-212201600 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:212153400-212203600 Weak transcription Psoas Muscle Psoas
12 chr1:212153600-212202600 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:212160200-212199800 Weak transcription Brain Substantia Nigra brain
14 chr1:212160200-212202600 Weak transcription Muscle Satellite Cultured Cells --
15 chr1:212170200-212197600 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:212170400-212202600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr1:212170800-212199200 Weak transcription Pancreas Pancrea
18 chr1:212170800-212207800 Weak transcription Right Ventricle heart
19 chr1:212171000-212199800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:212171200-212197800 Weak transcription Brain Cingulate Gyrus brain
21 chr1:212171200-212208000 Weak transcription Esophagus oesophagus
22 chr1:212171200-212208000 Weak transcription Lung lung
23 chr1:212171400-212197800 Weak transcription Aorta Aorta
24 chr1:212171600-212198000 Weak transcription Fetal Kidney kidney
25 chr1:212171600-212198200 Weak transcription Small Intestine intestine
26 chr1:212171600-212207400 Weak transcription Fetal Stomach stomach
27 chr1:212171800-212197600 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr1:212171800-212207600 Weak transcription Stomach Smooth Muscle stomach
29 chr1:212172200-212199800 Weak transcription Stomach Mucosa stomach
30 chr1:212173000-212204200 Weak transcription Fetal Heart heart
31 chr1:212180400-212206800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:212180800-212204000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:212181000-212197800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:212181600-212198000 Weak transcription NHLF lung
35 chr1:212182200-212205000 Weak transcription Thymus Thymus
36 chr1:212183200-212197800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr1:212183200-212200400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:212183200-212202600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:212183400-212197800 Weak transcription HUVEC blood vessel
40 chr1:212183600-212199800 Weak transcription Brain Hippocampus Middle brain
41 chr1:212184000-212198000 Weak transcription Brain Inferior Temporal Lobe brain
42 chr1:212184400-212198000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr1:212184400-212198000 Weak transcription NHEK skin
44 chr1:212184600-212197000 Weak transcription Fetal Muscle Leg muscle
45 chr1:212184600-212197600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:212185000-212197600 Weak transcription Fetal Brain Female brain
47 chr1:212185800-212198000 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr1:212186000-212199800 Weak transcription HepG2 liver
49 chr1:212187400-212199600 Weak transcription Liver Liver
50 chr1:212188400-212202400 Weak transcription ES-WA7 Cell Line embryonic stem cell

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Last update: Aug 31, 2015