The 2.0 version of rSNPBase

Variant report

Variant rs4951565
Chromosome Location chr1:212261287-212261288
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212214400-212278000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:212229600-212266600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:212229800-212261400 Weak transcription Fetal Intestine Small intestine
4 chr1:212229800-212263000 Weak transcription Duodenum Mucosa Duodenum
5 chr1:212229800-212266400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:212230000-212265200 Strong transcription HUES64 Cell Line embryonic stem cell
7 chr1:212230800-212261800 Weak transcription Primary B cells from cord blood blood
8 chr1:212231400-212261800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:212233000-212266400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:212234000-212265400 Strong transcription HUES48 Cell Line embryonic stem cell
11 chr1:212234000-212265800 Strong transcription HUES6 Cell Line embryonic stem cell
12 chr1:212234200-212267400 Strong transcription Dnd41 blood
13 chr1:212236000-212265200 Strong transcription K562 blood
14 chr1:212237000-212266200 Strong transcription iPS-20b Cell Line embryonic stem cell
15 chr1:212237200-212267000 Strong transcription iPS-18 Cell Line embryonic stem cell
16 chr1:212237600-212266800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:212237800-212262000 Strong transcription Hela-S3 cervix
18 chr1:212241600-212264200 Weak transcription Fetal Brain Female brain
19 chr1:212241600-212284600 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr1:212244600-212267200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr1:212247200-212261400 Weak transcription Fetal Kidney kidney
22 chr1:212248200-212261600 Weak transcription Psoas Muscle Psoas
23 chr1:212249400-212266000 Strong transcription A549 lung
24 chr1:212253000-212270800 Weak transcription Placenta Amnion Placenta Amnion
25 chr1:212253600-212261800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:212254800-212278000 Weak transcription NHDF-Ad bronchial
27 chr1:212255800-212261400 Weak transcription HUVEC blood vessel
28 chr1:212256000-212261600 Weak transcription Primary monocytes fromperipheralblood blood
29 chr1:212256000-212266600 Weak transcription Fetal Muscle Trunk muscle
30 chr1:212256000-212266800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr1:212256000-212271000 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr1:212256400-212264800 Weak transcription HepG2 liver
33 chr1:212256400-212265800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:212256400-212271200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr1:212256400-212278600 Weak transcription NHLF lung
36 chr1:212256800-212261600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:212257200-212261600 Weak transcription HMEC breast
38 chr1:212257200-212262800 Weak transcription Primary hematopoietic stem cells blood
39 chr1:212258400-212261400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:212259400-212264600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr1:212259600-212261400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:212259600-212262400 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr1:212259800-212261600 Strong transcription GM12878-XiMat blood
44 chr1:212260000-212261400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:212261000-212261400 Flanking Active TSS Brain Angular Gyrus brain
46 chr1:212261000-212261400 Enhancers Left Ventricle heart
47 chr1:212261000-212261400 Enhancers Right Ventricle heart
48 chr1:212261000-212261400 Genic enhancers NHEK skin
49 chr1:212261000-212261600 Active TSS Brain Anterior Caudate brain
50 chr1:212261000-212261600 Active TSS Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015