The 2.0 version of rSNPBase

Variant report

Variant rs7517565
Chromosome Location chr1:211978087-211978088
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211915800-211991800 Weak transcription Muscle Satellite Cultured Cells --
2 chr1:211916800-211994200 Weak transcription Fetal Brain Male brain
3 chr1:211919200-212001200 Weak transcription Gastric stomach
4 chr1:211923000-211991800 Weak transcription HSMM muscle
5 chr1:211924000-212002400 Weak transcription NHLF lung
6 chr1:211938200-211999400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:211939600-211978200 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr1:211939600-211992600 Weak transcription Esophagus oesophagus
9 chr1:211939800-212002400 Weak transcription HSMMtube muscle
10 chr1:211940000-212000600 Weak transcription Rectal Smooth Muscle rectum
11 chr1:211945800-211979000 Weak transcription Colon Smooth Muscle Colon
12 chr1:211946200-211984200 Weak transcription NH-A brain
13 chr1:211947400-212002400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:211950000-211987000 Weak transcription Fetal Thymus thymus
15 chr1:211951400-211978800 Weak transcription Fetal Lung lung
16 chr1:211951400-211992600 Weak transcription Ovary ovary
17 chr1:211952200-212003000 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:211957600-211985200 Weak transcription Brain Germinal Matrix brain
19 chr1:211957600-211998800 Weak transcription NHDF-Ad bronchial
20 chr1:211957600-212000800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:211958000-211984200 Weak transcription HUVEC blood vessel
22 chr1:211960800-211982200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr1:211960800-211987600 Weak transcription Pancreas Pancrea
24 chr1:211961200-212002200 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr1:211962400-211978600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:211962600-211983000 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr1:211963600-211985800 Weak transcription Hela-S3 cervix
28 chr1:211965800-211978800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:211965800-211985400 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:211965800-211992600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:211965800-212002200 Weak transcription Primary T cells from cord blood blood
32 chr1:211966000-211979000 Weak transcription Fetal Brain Female brain
33 chr1:211966400-211983000 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr1:211966400-211997400 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr1:211966400-212002400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:211966600-211978600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:211966600-211979200 Weak transcription Aorta Aorta
38 chr1:211966600-211983200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr1:211966600-211983800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr1:211966600-211984000 Weak transcription Fetal Muscle Trunk muscle
41 chr1:211966600-211985200 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr1:211966600-211987200 Weak transcription Stomach Smooth Muscle stomach
43 chr1:211966600-211988800 Weak transcription Lung lung
44 chr1:211966600-211992600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:211966600-211997400 Weak transcription Spleen Spleen
46 chr1:211967000-211998800 Weak transcription Osteobl bone
47 chr1:211969800-211978600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr1:211969800-211978800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr1:211970000-211979000 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr1:211970000-211979200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015