The 2.0 version of rSNPBase

Variant report

Variant rs34025182
Chromosome Location chr1:173462714-173462715
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173448000-173477000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:173456800-173464600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:173457200-173466200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:173457200-173466800 Weak transcription Gastric stomach
5 chr1:173457400-173463800 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:173457600-173464400 Weak transcription HepG2 liver
7 chr1:173457600-173466000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:173457800-173465000 Weak transcription Spleen Spleen
9 chr1:173458400-173464400 Weak transcription Hela-S3 cervix
10 chr1:173458600-173463000 Weak transcription Psoas Muscle Psoas
11 chr1:173458600-173467200 Weak transcription HSMMtube muscle
12 chr1:173458600-173468400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:173458600-173475600 Weak transcription Fetal Kidney kidney
14 chr1:173458600-173476600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:173458800-173463200 Weak transcription Dnd41 blood
16 chr1:173458800-173464800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:173458800-173465000 Weak transcription K562 blood
18 chr1:173458800-173466200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:173458800-173470400 Weak transcription Ovary ovary
20 chr1:173459000-173463000 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr1:173459000-173463200 Weak transcription Aorta Aorta
22 chr1:173459000-173463600 Weak transcription Brain Angular Gyrus brain
23 chr1:173459200-173462800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr1:173459200-173464200 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:173459200-173466000 Weak transcription Adipose Nuclei Adipose
26 chr1:173459400-173462800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:173459400-173463400 Weak transcription HSMM muscle
28 chr1:173459400-173474000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:173459400-173475400 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr1:173459600-173465200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr1:173459600-173470000 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr1:173459800-173469200 Weak transcription Left Ventricle heart
33 chr1:173460000-173464600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr1:173461800-173463000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:173461800-173470200 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:173462200-173464600 Weak transcription Liver Liver

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Last update: Aug 31, 2015