The 2.0 version of rSNPBase

Variant report

Variant rs4539167
Chromosome Location chr1:173410444-173410445
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173376200-173429000 Weak transcription Gastric stomach
2 chr1:173387600-173429000 Weak transcription Lung lung
3 chr1:173391800-173429000 Weak transcription Ovary ovary
4 chr1:173399400-173410800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:173399400-173410800 Weak transcription Pancreas Pancrea
6 chr1:173399400-173414400 Weak transcription Spleen Spleen
7 chr1:173399400-173424200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:173399600-173412800 Weak transcription Thymus Thymus
9 chr1:173399800-173413000 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:173399800-173413800 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr1:173399800-173415400 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr1:173399800-173415600 Weak transcription Liver Liver
13 chr1:173400200-173421000 Weak transcription Psoas Muscle Psoas
14 chr1:173400200-173422800 Weak transcription NH-A brain
15 chr1:173400400-173429000 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr1:173400600-173413000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr1:173400600-173413600 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr1:173400600-173413800 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr1:173400600-173428800 Weak transcription Fetal Stomach stomach
20 chr1:173400800-173410800 Weak transcription Primary hematopoietic stem cells blood
21 chr1:173400800-173410800 Weak transcription Brain Angular Gyrus brain
22 chr1:173400800-173411200 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:173400800-173412600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr1:173400800-173413400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:173400800-173413800 Weak transcription Primary B cells from peripheral blood blood
26 chr1:173400800-173413800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr1:173400800-173413800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr1:173400800-173413800 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr1:173400800-173414000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr1:173400800-173414200 Weak transcription Fetal Muscle Trunk muscle
31 chr1:173400800-173420600 Weak transcription Hela-S3 cervix
32 chr1:173400800-173421000 Weak transcription Colon Smooth Muscle Colon
33 chr1:173400800-173422800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:173400800-173429000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:173400800-173429000 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:173401000-173415600 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr1:173401000-173418000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:173401000-173421000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:173401000-173421000 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr1:173401000-173422800 Weak transcription Muscle Satellite Cultured Cells --
41 chr1:173401000-173428800 Weak transcription Brain Hippocampus Middle brain
42 chr1:173401000-173429000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr1:173401000-173429000 Weak transcription Left Ventricle heart
44 chr1:173401200-173413200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:173401200-173413200 Weak transcription H9 Cell Line embryonic stem cell
46 chr1:173401200-173422800 Weak transcription HSMM muscle
47 chr1:173401400-173412800 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr1:173401800-173429000 Weak transcription Primary B cells from cord blood blood
49 chr1:173404200-173410800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:173404200-173429000 Weak transcription Adipose Nuclei Adipose

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015