The 2.0 version of rSNPBase

Variant report

Variant rs35845062
Chromosome Location chr1:173401367-173401368
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173376200-173429000 Weak transcription Gastric stomach
2 chr1:173387600-173429000 Weak transcription Lung lung
3 chr1:173391800-173429000 Weak transcription Ovary ovary
4 chr1:173399200-173405800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:173399400-173402600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:173399400-173408600 Weak transcription Aorta Aorta
7 chr1:173399400-173410000 Weak transcription Primary T cells fromperipheralblood blood
8 chr1:173399400-173410800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:173399400-173410800 Weak transcription Pancreas Pancrea
10 chr1:173399400-173414400 Weak transcription Spleen Spleen
11 chr1:173399400-173424200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:173399600-173401400 Enhancers Fetal Muscle Leg muscle
13 chr1:173399600-173408000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr1:173399600-173408000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:173399600-173408200 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr1:173399600-173408600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr1:173399600-173412800 Weak transcription Thymus Thymus
18 chr1:173399800-173401400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr1:173399800-173401400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:173399800-173401400 Enhancers NHDF-Ad bronchial
21 chr1:173399800-173413000 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr1:173399800-173413800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr1:173399800-173415400 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr1:173399800-173415600 Weak transcription Liver Liver
25 chr1:173400000-173407400 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr1:173400200-173402200 Weak transcription HMEC breast
27 chr1:173400200-173408000 Weak transcription Stomach Smooth Muscle stomach
28 chr1:173400200-173408000 Weak transcription HepG2 liver
29 chr1:173400200-173421000 Weak transcription Psoas Muscle Psoas
30 chr1:173400200-173422800 Weak transcription NH-A brain
31 chr1:173400400-173401400 Weak transcription Primary B cells from cord blood blood
32 chr1:173400400-173401400 Genic enhancers K562 blood
33 chr1:173400400-173405800 Weak transcription Primary T cells from cord blood blood
34 chr1:173400400-173429000 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr1:173400600-173413000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:173400600-173413600 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr1:173400600-173413800 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr1:173400600-173428800 Weak transcription Fetal Stomach stomach
39 chr1:173400800-173401400 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr1:173400800-173401600 Weak transcription Fetal Lung lung
41 chr1:173400800-173408000 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:173400800-173408200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr1:173400800-173408600 Weak transcription Primary monocytes fromperipheralblood blood
44 chr1:173400800-173410800 Weak transcription Primary hematopoietic stem cells blood
45 chr1:173400800-173410800 Weak transcription Brain Angular Gyrus brain
46 chr1:173400800-173411200 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr1:173400800-173412600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:173400800-173413400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:173400800-173413800 Weak transcription Primary B cells from peripheral blood blood
50 chr1:173400800-173413800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015