The 2.0 version of rSNPBase

Variant report

Variant rs4244195
Chromosome Location chr1:173390145-173390146
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173372000-173398600 Weak transcription Brain Substantia Nigra brain
2 chr1:173375200-173398600 Weak transcription Esophagus oesophagus
3 chr1:173376200-173429000 Weak transcription Gastric stomach
4 chr1:173376400-173400800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:173376600-173392600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:173378400-173398400 Weak transcription Brain Angular Gyrus brain
7 chr1:173379000-173398400 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr1:173379200-173393200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:173380200-173391200 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr1:173380200-173398400 Weak transcription Brain Hippocampus Middle brain
11 chr1:173380200-173398600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:173380200-173398600 Weak transcription Psoas Muscle Psoas
13 chr1:173380400-173392600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:173380400-173398400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:173380400-173398600 Weak transcription Thymus Thymus
16 chr1:173380400-173398800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:173383000-173390600 Weak transcription Ovary ovary
18 chr1:173383000-173398600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:173385600-173391400 Weak transcription Fetal Muscle Leg muscle
20 chr1:173385600-173398600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:173385600-173398600 Weak transcription Spleen Spleen
22 chr1:173386000-173397800 Weak transcription Fetal Muscle Trunk muscle
23 chr1:173387600-173429000 Weak transcription Lung lung
24 chr1:173387800-173391000 Weak transcription Primary T cells from cord blood blood
25 chr1:173387800-173391400 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:173387800-173398400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr1:173387800-173398600 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr1:173388000-173390400 Weak transcription HSMMtube muscle
29 chr1:173388000-173398400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:173388000-173398400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr1:173388000-173398600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr1:173388200-173390600 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr1:173388200-173391200 Weak transcription Primary T cells fromperipheralblood blood
34 chr1:173389200-173390800 Enhancers HSMM muscle
35 chr1:173389600-173390600 Weak transcription Primary monocytes fromperipheralblood blood
36 chr1:173389600-173391200 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr1:173389600-173391200 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr1:173389600-173391400 Weak transcription Primary B cells from peripheral blood blood
39 chr1:173389600-173391400 Weak transcription HepG2 liver
40 chr1:173389600-173391600 Weak transcription Primary hematopoietic stem cells blood
41 chr1:173389600-173391600 Weak transcription Aorta Aorta
42 chr1:173389600-173392000 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr1:173389600-173392600 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr1:173389600-173392600 Weak transcription NHEK skin
45 chr1:173389600-173393000 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:173389600-173393200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:173389600-173393400 Weak transcription Placenta Amnion Placenta Amnion
48 chr1:173389600-173393600 Weak transcription Hela-S3 cervix
49 chr1:173389600-173394200 Weak transcription H9 Cell Line embryonic stem cell
50 chr1:173389600-173394200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015