The 2.0 version of rSNPBase

Variant report

Variant rs34060994
Chromosome Location chr4:54300521-54300522
allele AT/GC
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54244600-54310600 Weak transcription Spleen Spleen
2 chr4:54244600-54319200 Weak transcription Pancreas Pancrea
3 chr4:54246200-54319200 Weak transcription Aorta Aorta
4 chr4:54246600-54311200 Weak transcription Small Intestine intestine
5 chr4:54253400-54327200 Weak transcription Colonic Mucosa Colon
6 chr4:54256600-54306200 Weak transcription Stomach Mucosa stomach
7 chr4:54256600-54319200 Weak transcription Gastric stomach
8 chr4:54267800-54302400 Weak transcription Psoas Muscle Psoas
9 chr4:54268000-54310400 Weak transcription Rectal Smooth Muscle rectum
10 chr4:54268000-54327600 Weak transcription Colon Smooth Muscle Colon
11 chr4:54268400-54319800 Weak transcription A549 lung
12 chr4:54269400-54303000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr4:54270000-54330800 Weak transcription Brain Substantia Nigra brain
14 chr4:54270200-54316600 Weak transcription Esophagus oesophagus
15 chr4:54276400-54319000 Weak transcription H9 Cell Line embryonic stem cell
16 chr4:54276600-54302200 Weak transcription Fetal Brain Female brain
17 chr4:54276600-54319000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr4:54276600-54319000 Weak transcription Lung lung
19 chr4:54276800-54310600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr4:54276800-54316800 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr4:54276800-54324800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr4:54286200-54303000 Weak transcription Fetal Stomach stomach
23 chr4:54286200-54310800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr4:54286200-54316600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr4:54287800-54310400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr4:54288200-54307600 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr4:54288200-54310800 Weak transcription Brain Hippocampus Middle brain
28 chr4:54291000-54310600 Weak transcription Right Ventricle heart
29 chr4:54291400-54302800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr4:54291400-54313200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr4:54291800-54302000 Strong transcription NHDF-Ad bronchial
32 chr4:54291800-54315000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr4:54291800-54329400 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr4:54292000-54302200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr4:54292000-54314400 Strong transcription Primary monocytes fromperipheralblood blood
36 chr4:54292200-54331200 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr4:54292400-54304800 Strong transcription Primary T cells fromperipheralblood blood
38 chr4:54293000-54305000 Strong transcription Adipose Nuclei Adipose
39 chr4:54293200-54302000 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr4:54293200-54302800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr4:54293200-54303200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr4:54294000-54325600 Weak transcription Fetal Heart heart
43 chr4:54294400-54309200 Weak transcription NHEK skin
44 chr4:54294400-54320600 Weak transcription HSMMtube muscle
45 chr4:54295200-54331600 Weak transcription Hela-S3 cervix
46 chr4:54295400-54316600 Weak transcription Ovary ovary
47 chr4:54295600-54301000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr4:54295600-54310400 Weak transcription Brain Angular Gyrus brain
49 chr4:54295600-54311400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr4:54295600-54316600 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015