The 2.0 version of rSNPBase

Variant report

Variant rs17082847
Chromosome Location chr4:54331563-54331564
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54295200-54331600 Weak transcription Hela-S3 cervix
2 chr4:54295600-54339400 Weak transcription Fetal Brain Male brain
3 chr4:54316800-54332600 Weak transcription Esophagus oesophagus
4 chr4:54317400-54332600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr4:54320000-54332600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr4:54320000-54332600 Weak transcription Aorta Aorta
7 chr4:54320000-54332800 Weak transcription Fetal Stomach stomach
8 chr4:54320000-54342000 Weak transcription Pancreas Pancrea
9 chr4:54320000-54353200 Weak transcription Gastric stomach
10 chr4:54321000-54332600 Weak transcription H9 Cell Line embryonic stem cell
11 chr4:54321200-54331800 Weak transcription Ovary ovary
12 chr4:54321400-54341800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr4:54321800-54339800 Weak transcription Placenta Amnion Placenta Amnion
14 chr4:54322200-54331600 Weak transcription HSMMtube muscle
15 chr4:54326400-54332200 Weak transcription Fetal Intestine Small intestine
16 chr4:54326400-54332600 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr4:54327600-54347800 Weak transcription Fetal Muscle Trunk muscle
18 chr4:54327800-54334600 Weak transcription NHLF lung
19 chr4:54327800-54335200 Weak transcription HMEC breast
20 chr4:54327800-54341800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr4:54327800-54362200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr4:54328000-54332000 Weak transcription HUVEC blood vessel
23 chr4:54328000-54332400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr4:54328000-54332600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr4:54328000-54332800 Weak transcription A549 lung
26 chr4:54328000-54339400 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr4:54328200-54332400 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr4:54328200-54362000 Weak transcription Brain Inferior Temporal Lobe brain
29 chr4:54328400-54333600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr4:54328400-54362000 Weak transcription Brain Angular Gyrus brain
31 chr4:54328600-54331800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr4:54328600-54332600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr4:54328600-54332600 Weak transcription Fetal Muscle Leg muscle
34 chr4:54328600-54339600 Weak transcription Fetal Brain Female brain
35 chr4:54329200-54332200 Weak transcription Primary monocytes fromperipheralblood blood
36 chr4:54329200-54332400 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr4:54329200-54332400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr4:54329200-54332400 Weak transcription Duodenum Mucosa Duodenum
39 chr4:54329200-54332600 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr4:54329400-54331600 Weak transcription Osteobl bone
41 chr4:54329400-54332400 Weak transcription Primary B cells from peripheral blood blood
42 chr4:54329400-54332800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr4:54329600-54332000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr4:54329600-54332200 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr4:54329600-54332200 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr4:54329600-54332400 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr4:54329600-54332400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr4:54329600-54332400 Weak transcription Dnd41 blood
49 chr4:54329600-54339000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr4:54329600-54341600 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015