Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:21321831..21323587-chr2:21325099..21327379,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10221768	0.85[EUR][1000 genomes]
rs12714264	0.84[AMR][1000 genomes]
rs13011615	0.85[EUR][1000 genomes]
rs13423380	0.98[EUR][1000 genomes]
rs312944	1.00[ASN][1000 genomes]
rs34722314	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs34882389	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34916112	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35913552	0.86[EUR][1000 genomes]
rs36018965	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs478588	1.00[ASN][1000 genomes]
rs481069	0.87[EUR][1000 genomes]
rs541041	1.00[ASN][1000 genomes]
rs548145	1.00[ASN][1000 genomes]
rs562338	1.00[ASN][1000 genomes]
rs563290	1.00[ASN][1000 genomes]
rs580889	1.00[ASN][1000 genomes]
rs581411	1.00[ASN][1000 genomes]
rs614303	1.00[ASN][1000 genomes]
rs66774912	0.82[EUR][1000 genomes]
rs668948	1.00[ASN][1000 genomes]
rs672889	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67332771	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873728	chr2:21250914-21460786	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21315800-21326400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr2:21320800-21326200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr2:21321200-21326200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr2:21321400-21326400	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr2:21321400-21326800	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr2:21321600-21326200	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr2:21321800-21326200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr2:21323000-21326200	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr2:21325400-21328200	Enhancers	Liver	Liver
10	chr2:21325600-21327600	Enhancers	HepG2	liver
11	chr2:21325800-21327400	Enhancers	Duodenum Mucosa	Duodenum
12	chr2:21326000-21326800	Enhancers	Fetal Intestine Large	intestine
13	chr2:21326000-21327400	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr2:21326000-21327400	Enhancers	Fetal Intestine Small	intestine

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