Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:21273537..21275484-chr2:21337666..21339362,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10221768	0.85[EUR][1000 genomes]
rs12714264	0.84[AMR][1000 genomes]
rs13011615	0.85[EUR][1000 genomes]
rs13423380	0.98[EUR][1000 genomes]
rs312944	1.00[ASN][1000 genomes]
rs34722314	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs34872576	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34882389	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35913552	0.86[EUR][1000 genomes]
rs36018965	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs478588	1.00[ASN][1000 genomes]
rs481069	0.87[EUR][1000 genomes]
rs541041	1.00[ASN][1000 genomes]
rs548145	1.00[ASN][1000 genomes]
rs562338	1.00[ASN][1000 genomes]
rs563290	1.00[ASN][1000 genomes]
rs580889	1.00[ASN][1000 genomes]
rs581411	1.00[ASN][1000 genomes]
rs614303	1.00[ASN][1000 genomes]
rs66774912	0.82[EUR][1000 genomes]
rs668948	1.00[ASN][1000 genomes]
rs672889	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67332771	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873728	chr2:21250914-21460786	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21331800-21340600	Weak transcription	Liver	Liver

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