Variant report

Variant	rs35337102
Chromosome Location	chr7:122136371-122136372
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10235626	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10238269	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10239128	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10246078	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10264820	0.96[EUR][1000 genomes]
rs10269374	0.96[EUR][1000 genomes]
rs10269606	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12706412	0.81[EUR][1000 genomes]
rs12706415	0.82[AMR][1000 genomes]
rs13222975	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13231250	0.92[EUR][1000 genomes]
rs13238360	1.00[EUR][1000 genomes]
rs13239116	0.82[AMR][1000 genomes]
rs13241783	0.82[AMR][1000 genomes]
rs17380636	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28406245	0.82[AMR][1000 genomes]
rs28487917	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28492775	0.82[AMR][1000 genomes]
rs28522818	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34133916	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34427116	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35866765	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6955734	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6980172	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9656294	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122047000-122155400	Weak transcription	Left Ventricle	heart
2	chr7:122115400-122140000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr7:122136200-122136400	Enhancers	Gastric	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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