Variant report

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10235626	0.92[EUR][1000 genomes]
rs10238269	0.92[EUR][1000 genomes]
rs10239128	1.00[EUR][1000 genomes]
rs10246078	0.92[EUR][1000 genomes]
rs10264820	0.88[EUR][1000 genomes]
rs10269374	0.88[EUR][1000 genomes]
rs10269606	0.92[EUR][1000 genomes]
rs11973627	0.86[EUR][1000 genomes]
rs11984390	0.80[EUR][1000 genomes]
rs12706410	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12706411	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12706412	0.88[EUR][1000 genomes]
rs12706413	0.89[AMR][1000 genomes]
rs12706425	0.87[AMR][1000 genomes]
rs13222975	0.92[EUR][1000 genomes]
rs13238360	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17380636	0.92[EUR][1000 genomes]
rs17463779	0.86[EUR][1000 genomes]
rs17463849	0.86[EUR][1000 genomes]
rs28487917	0.92[EUR][1000 genomes]
rs28522818	0.92[EUR][1000 genomes]
rs34133916	1.00[EUR][1000 genomes]
rs34252702	0.86[EUR][1000 genomes]
rs34427116	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34565849	0.89[AMR][1000 genomes]
rs35090045	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35168749	0.86[EUR][1000 genomes]
rs35337102	0.92[EUR][1000 genomes]
rs35604970	0.87[AMR][1000 genomes]
rs35636140	0.86[EUR][1000 genomes]
rs35710523	0.89[AMR][1000 genomes]
rs35760934	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35866765	0.92[EUR][1000 genomes]
rs35967022	0.87[AMR][1000 genomes]
rs6955734	0.88[EUR][1000 genomes]
rs6980172	0.92[EUR][1000 genomes]
rs71571077	0.86[EUR][1000 genomes]
rs71573096	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122047000-122155400	Weak transcription	Left Ventricle	heart
2	chr7:122056200-122122200	Weak transcription	Liver	Liver
3	chr7:122084800-122118600	Weak transcription	Lung	lung
4	chr7:122091400-122130200	Weak transcription	Ovary	ovary
5	chr7:122091400-122132800	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr7:122104800-122123400	Weak transcription	Fetal Stomach	stomach
7	chr7:122114200-122117000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr7:122114600-122119000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr7:122115400-122140000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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