The 2.0 version of rSNPBase

Variant report

Variant rs35533573
Chromosome Location chr17:67514192-67514193
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:67494600-67522800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr17:67495000-67522600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr17:67497600-67530200 Weak transcription Gastric stomach
4 chr17:67498600-67515400 Weak transcription Left Ventricle heart
5 chr17:67498600-67515400 Weak transcription Ovary ovary
6 chr17:67498600-67519600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr17:67498600-67523000 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr17:67498600-67535600 Weak transcription Stomach Mucosa stomach
9 chr17:67498600-67538800 Weak transcription Right Ventricle heart
10 chr17:67498800-67515400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr17:67498800-67517000 Weak transcription Fetal Kidney kidney
12 chr17:67499000-67515400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr17:67499000-67519000 Weak transcription Pancreas Pancrea
14 chr17:67499000-67520000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr17:67499000-67521000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr17:67499000-67535000 Weak transcription Fetal Brain Male brain
17 chr17:67499000-67560200 Weak transcription Fetal Brain Female brain
18 chr17:67499200-67515200 Weak transcription HepG2 liver
19 chr17:67499600-67515400 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr17:67499600-67520000 Weak transcription Colonic Mucosa Colon
21 chr17:67499800-67515200 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr17:67499800-67518800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr17:67499800-67535200 Weak transcription Small Intestine intestine
24 chr17:67500400-67514400 Weak transcription Primary hematopoietic stem cells blood
25 chr17:67500600-67514800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr17:67501000-67514800 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr17:67502800-67515400 Weak transcription Psoas Muscle Psoas
28 chr17:67503000-67515200 Weak transcription Thymus Thymus
29 chr17:67503000-67515400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr17:67503000-67530200 Weak transcription H9 Cell Line embryonic stem cell
31 chr17:67504000-67545200 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr17:67505200-67516800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr17:67505600-67535000 Weak transcription Esophagus oesophagus
34 chr17:67506200-67519600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr17:67507600-67521400 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr17:67507800-67519200 Weak transcription Brain Hippocampus Middle brain
37 chr17:67508000-67519400 Weak transcription Brain Inferior Temporal Lobe brain
38 chr17:67508400-67519200 Weak transcription Brain Substantia Nigra brain
39 chr17:67508400-67527400 Weak transcription Brain Anterior Caudate brain
40 chr17:67509400-67515400 Weak transcription Adipose Nuclei Adipose
41 chr17:67511200-67515000 Weak transcription Dnd41 blood
42 chr17:67511400-67519600 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr17:67511600-67516000 Weak transcription Rectal Smooth Muscle rectum
44 chr17:67511600-67519600 Strong transcription Rectal Mucosa Donor 31 rectum
45 chr17:67511800-67514200 Enhancers Primary B cells from peripheral blood blood
46 chr17:67511800-67543000 Strong transcription Primary T cells from cord blood blood
47 chr17:67512000-67515800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr17:67512000-67515800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr17:67512200-67517800 Strong transcription Rectal Mucosa Donor 29 rectum
50 chr17:67512400-67518400 Strong transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015