Variant report

Variant	rs66613474
Chromosome Location	chr17:67492070-67492071
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11651278	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11657645	0.95[EUR][1000 genomes]
rs11867183	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12940170	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12946809	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12948059	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17769598	0.96[EUR][1000 genomes]
rs34498161	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34521206	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35533573	0.95[EUR][1000 genomes]
rs67612721	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:67420000-67498200	Weak transcription	Thymus	Thymus
2	chr17:67450200-67512600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr17:67479400-67497000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr17:67482000-67497000	Weak transcription	Right Atrium	heart
5	chr17:67482200-67497800	Weak transcription	Primary hematopoietic stem cells	blood
6	chr17:67483200-67496200	Weak transcription	Small Intestine	intestine
7	chr17:67483600-67497000	Weak transcription	Duodenum Mucosa	Duodenum
8	chr17:67484200-67492800	Weak transcription	Primary T cells from cord blood	blood
9	chr17:67485000-67501800	Weak transcription	Primary T helper cells fromperipheralblood	blood
10	chr17:67486800-67497000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr17:67489000-67494000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr17:67489000-67494200	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr17:67489000-67494400	Weak transcription	HUES48 Cell Line	embryonic stem cell
14	chr17:67489000-67494600	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr17:67489000-67497000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr17:67489000-67497200	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr17:67489200-67493000	Weak transcription	Placenta	Placenta
18	chr17:67489200-67494200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr17:67489200-67494600	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr17:67489200-67494800	Weak transcription	Skeletal Muscle Female	skeletal muscle
21	chr17:67489200-67497400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr17:67489600-67494600	Weak transcription	Rectal Mucosa Donor 31	rectum
23	chr17:67489800-67492800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr17:67489800-67494600	Weak transcription	Psoas Muscle	Psoas
25	chr17:67490400-67493200	Weak transcription	H1 Cell Line	embryonic stem cell
26	chr17:67490400-67497600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
27	chr17:67490800-67493400	Weak transcription	HUES6 Cell Line	embryonic stem cell
28	chr17:67490800-67494200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr17:67491400-67494200	Enhancers	Primary B cells from peripheral blood	blood
30	chr17:67491600-67493600	Enhancers	Monocytes-CD14+_RO01746	blood
31	chr17:67491600-67494000	Enhancers	Primary monocytes fromperipheralblood	blood
32	chr17:67492000-67492400	Enhancers	iPS-18 Cell Line	embryonic stem cell

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