The 2.0 version of rSNPBase

Variant report

Variant rs35569214
Chromosome Location chr3:177650015-177650016
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:177645600-177652000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:177646400-177651000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr3:177646600-177650400 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr3:177646800-177652000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr3:177647200-177650400 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr3:177647200-177650400 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr3:177647200-177651200 Weak transcription HSMMtube muscle
8 chr3:177647400-177650200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr3:177648000-177652400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr3:177648000-177652400 Enhancers Muscle Satellite Cultured Cells --
11 chr3:177648200-177650400 Enhancers HMEC breast
12 chr3:177648200-177650800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr3:177648200-177655000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr3:177648400-177652800 Enhancers Osteobl bone
15 chr3:177648400-177653000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr3:177648600-177651800 Weak transcription Fetal Heart heart
17 chr3:177648600-177652400 Enhancers Brain Germinal Matrix brain
18 chr3:177648600-177652600 Enhancers HSMM muscle
19 chr3:177648600-177652600 Enhancers NHDF-Ad bronchial
20 chr3:177648800-177650400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
21 chr3:177648800-177650400 Enhancers Adipose Nuclei Adipose
22 chr3:177648800-177650800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:177648800-177652600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr3:177649000-177650200 Weak transcription Fetal Lung lung
25 chr3:177649000-177652200 Weak transcription Placenta Amnion Placenta Amnion
26 chr3:177649200-177650200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr3:177649200-177651200 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr3:177649200-177651200 Weak transcription NHLF lung
29 chr3:177649200-177651800 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr3:177649200-177652600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr3:177649200-177657000 Weak transcription Esophagus oesophagus
32 chr3:177649400-177651400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr3:177649600-177650400 Enhancers Right Atrium heart
34 chr3:177649600-177652400 Enhancers HUVEC blood vessel
35 chr3:177649800-177650400 Enhancers Spleen Spleen
36 chr3:177649800-177652000 Enhancers A549 lung
37 chr3:177649800-177652400 Enhancers NH-A brain
38 chr3:177649800-177654200 Enhancers Primary hematopoietic stem cells blood
39 chr3:177650000-177650400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr3:177650000-177652000 Weak transcription Psoas Muscle Psoas
41 chr3:177650000-177652200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr3:177650000-177652600 Enhancers Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015