Variant report

Variant	rs36011147
Chromosome Location	chr3:133700328-133700329
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:133700315..133702801-chr3:133704322..133706297,2	K562	blood:

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11719536	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11720843	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs28547582	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs34603519	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs34856813	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs35843040	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4241361	0.83[EUR][1000 genomes]
rs4241362	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4331673	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4634113	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9828294	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9840711	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9842346	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9842594	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9852999	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9855403	1.00[AFR][1000 genomes]
rs9857498	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9866790	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9881514	1.00[AFR][1000 genomes]
rs9882333	0.82[EUR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133664000-133705400	Weak transcription	Fetal Intestine Small	intestine
2	chr3:133664800-133713000	Weak transcription	Gastric	stomach
3	chr3:133688000-133710800	Weak transcription	Fetal Lung	lung
4	chr3:133694600-133703800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr3:133695800-133705400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr3:133696000-133709400	Weak transcription	Esophagus	oesophagus
7	chr3:133698200-133704600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr3:133698200-133705400	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr3:133698400-133704200	Weak transcription	Fetal Stomach	stomach
10	chr3:133698600-133701600	Weak transcription	Pancreas	Pancrea
11	chr3:133699000-133703400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr3:133699200-133701600	Weak transcription	Fetal Thymus	thymus
13	chr3:133699400-133705200	Weak transcription	Stomach Mucosa	stomach
14	chr3:133699600-133705200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr3:133699800-133701800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr3:133699800-133701800	Weak transcription	Fetal Muscle Leg	muscle
17	chr3:133699800-133705200	Weak transcription	HUVEC	blood vessel
18	chr3:133699800-133707400	Weak transcription	Spleen	Spleen
19	chr3:133699800-133708200	Weak transcription	Lung	lung
20	chr3:133699800-133709400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr3:133699800-133709400	Weak transcription	Right Ventricle	heart
22	chr3:133700000-133702400	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr3:133700000-133705200	Weak transcription	Fetal Muscle Trunk	muscle
24	chr3:133700200-133705200	Weak transcription	Left Ventricle	heart

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