Variant report

Variant rs3789929
Chromosome Location chr10:98004697-98004698
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97952000-98010200 Weak transcription Fetal Kidney kidney
2 chr10:97989200-98005400 Genic enhancers Primary B cells from peripheral blood blood
3 chr10:97994400-98009000 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr10:97996200-98009000 Weak transcription Gastric stomach
5 chr10:97996400-98029200 Weak transcription Fetal Stomach stomach
6 chr10:98001200-98005200 Genic enhancers Primary B cells from cord blood blood
7 chr10:98001800-98004800 Enhancers Fetal Intestine Large intestine
8 chr10:98002000-98008200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr10:98002000-98009200 Weak transcription Spleen Spleen
10 chr10:98002000-98015400 Weak transcription Esophagus oesophagus
11 chr10:98002800-98008400 Weak transcription Stomach Mucosa stomach
12 chr10:98003000-98004800 Enhancers Fetal Intestine Small intestine
13 chr10:98003400-98006400 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr10:98003400-98009000 Weak transcription Pancreas Pancrea
15 chr10:98003800-98004800 Genic enhancers Liver Liver
16 chr10:98003800-98004800 Transcr. at gene 5' and 3' GM12878-XiMat blood
17 chr10:98004400-98004800 Weak transcription Colonic Mucosa Colon
18 chr10:98004400-98004800 Enhancers Duodenum Mucosa Duodenum
19 chr10:98004400-98009400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr10:98004600-98009200 Weak transcription Small Intestine intestine
21 chr10:98004600-98009400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr10:98004600-98009800 Weak transcription Rectal Mucosa Donor 31 rectum

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