The 2.0 version of rSNPBase

Variant report

Variant rs3862795
Chromosome Location chr11:72538706-72538707
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72528800-72542800 Strong transcription Primary hematopoietic stem cells short term culture blood
2 chr11:72529000-72543600 Strong transcription Dnd41 blood
3 chr11:72532600-72542400 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr11:72533200-72541400 Weak transcription HSMMtube muscle
5 chr11:72533600-72539000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr11:72533600-72539000 Weak transcription Liver Liver
7 chr11:72533600-72539200 Weak transcription Left Ventricle heart
8 chr11:72533600-72539200 Weak transcription Ovary ovary
9 chr11:72533600-72539400 Weak transcription Gastric stomach
10 chr11:72533600-72542200 Weak transcription NHEK skin
11 chr11:72533600-72542400 Weak transcription Fetal Lung lung
12 chr11:72533600-72542600 Weak transcription Stomach Mucosa stomach
13 chr11:72533600-72542800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr11:72533600-72542800 Weak transcription Hela-S3 cervix
15 chr11:72533800-72538800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr11:72533800-72538800 Weak transcription Adipose Nuclei Adipose
17 chr11:72533800-72538800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr11:72533800-72539000 Weak transcription NHLF lung
19 chr11:72533800-72539200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr11:72533800-72539200 Weak transcription Colonic Mucosa Colon
21 chr11:72533800-72539200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr11:72533800-72539400 Weak transcription Aorta Aorta
23 chr11:72533800-72539400 Weak transcription Pancreas Pancrea
24 chr11:72533800-72539600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr11:72533800-72539600 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr11:72533800-72541000 Strong transcription Primary hematopoietic stem cells blood
27 chr11:72533800-72542000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr11:72533800-72542400 Weak transcription Brain Angular Gyrus brain
29 chr11:72533800-72542600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr11:72533800-72542600 Weak transcription Brain Substantia Nigra brain
31 chr11:72533800-72542600 Weak transcription Colon Smooth Muscle Colon
32 chr11:72533800-72542600 Weak transcription Placenta Amnion Placenta Amnion
33 chr11:72533800-72542600 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr11:72533800-72542600 Weak transcription Rectal Smooth Muscle rectum
35 chr11:72533800-72542600 Weak transcription HMEC breast
36 chr11:72533800-72549400 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr11:72534000-72539000 Weak transcription Muscle Satellite Cultured Cells --
38 chr11:72534000-72539000 Weak transcription Osteobl bone
39 chr11:72534000-72539400 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr11:72534000-72539400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr11:72534000-72539400 Weak transcription Brain Germinal Matrix brain
42 chr11:72534000-72539600 Weak transcription Brain Anterior Caudate brain
43 chr11:72534000-72540200 Weak transcription Brain Inferior Temporal Lobe brain
44 chr11:72534000-72541000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
45 chr11:72534000-72541800 Strong transcription Thymus Thymus
46 chr11:72534000-72542000 Strong transcription Esophagus oesophagus
47 chr11:72534000-72542400 Weak transcription Brain Hippocampus Middle brain
48 chr11:72534000-72542600 Weak transcription Brain Cingulate Gyrus brain
49 chr11:72534000-72542600 Weak transcription A549 lung
50 chr11:72534000-72542800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015