The 2.0 version of rSNPBase

Variant report

Variant rs6592501
Chromosome Location chr11:72654139-72654140
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72624200-72654400 Weak transcription Duodenum Mucosa Duodenum
2 chr11:72630800-72662400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr11:72633000-72654400 Weak transcription Primary T cells fromperipheralblood blood
4 chr11:72633000-72680000 Weak transcription Dnd41 blood
5 chr11:72633000-72684000 Weak transcription Primary T cells from cord blood blood
6 chr11:72633200-72668400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr11:72633400-72679400 Weak transcription Fetal Thymus thymus
8 chr11:72636200-72694800 Weak transcription Adipose Nuclei Adipose
9 chr11:72636400-72680200 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr11:72636400-72712600 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr11:72637000-72721600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr11:72637400-72666000 Weak transcription Ovary ovary
13 chr11:72637400-72666400 Weak transcription Right Ventricle heart
14 chr11:72641200-72654400 Weak transcription Fetal Kidney kidney
15 chr11:72641800-72680200 Weak transcription HSMMtube muscle
16 chr11:72643600-72676400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr11:72643800-72668400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr11:72643800-72673000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr11:72644000-72662000 Weak transcription Osteobl bone
20 chr11:72644600-72662000 Weak transcription Liver Liver
21 chr11:72647200-72657000 Weak transcription Primary hematopoietic stem cells blood
22 chr11:72647200-72670800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr11:72647200-72680800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr11:72647400-72662200 Weak transcription Fetal Lung lung
25 chr11:72648800-72660200 Weak transcription Primary monocytes fromperipheralblood blood
26 chr11:72648800-72661800 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr11:72649000-72721600 Weak transcription Thymus Thymus
28 chr11:72649600-72681600 Weak transcription Aorta Aorta
29 chr11:72649800-72657800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr11:72649800-72679400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr11:72650400-72658000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr11:72650400-72666600 Weak transcription HepG2 liver
33 chr11:72650800-72654400 Strong transcription Primary B cells from peripheral blood blood
34 chr11:72651400-72662400 Weak transcription Brain Inferior Temporal Lobe brain
35 chr11:72651400-72666400 Weak transcription HUVEC blood vessel
36 chr11:72651400-72696600 Weak transcription Brain Anterior Caudate brain
37 chr11:72651600-72680400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr11:72651600-72680600 Weak transcription Fetal Stomach stomach
39 chr11:72651800-72674600 Weak transcription Fetal Muscle Leg muscle
40 chr11:72651800-72680800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr11:72652000-72666000 Weak transcription Brain Substantia Nigra brain
42 chr11:72652200-72666000 Weak transcription Left Ventricle heart
43 chr11:72653200-72660800 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr11:72653400-72657600 Weak transcription GM12878-XiMat blood
45 chr11:72653400-72664200 Weak transcription Fetal Intestine Small intestine
46 chr11:72653400-72681800 Weak transcription Pancreas Pancrea
47 chr11:72654000-72657800 Weak transcription Primary B cells from cord blood blood
48 chr11:72654000-72671200 Weak transcription HSMM muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015