The 2.0 version of rSNPBase

Variant report

Variant rs6592493
Chromosome Location chr11:72562264-72562265
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72540200-72616600 Strong transcription Primary B cells from peripheral blood blood
2 chr11:72540600-72589800 Strong transcription Primary B cells from cord blood blood
3 chr11:72543200-72614800 Weak transcription Psoas Muscle Psoas
4 chr11:72543400-72603000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr11:72550000-72600400 Weak transcription Pancreas Pancrea
6 chr11:72551200-72563000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr11:72552000-72567000 Weak transcription NH-A brain
8 chr11:72552200-72575400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr11:72552200-72580400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr11:72552400-72597400 Weak transcription HMEC breast
11 chr11:72552800-72578000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr11:72553400-72567000 Weak transcription HUVEC blood vessel
13 chr11:72553600-72576000 Weak transcription NHEK skin
14 chr11:72554400-72564000 Weak transcription Brain Germinal Matrix brain
15 chr11:72554400-72567000 Weak transcription Muscle Satellite Cultured Cells --
16 chr11:72554400-72567000 Weak transcription Adipose Nuclei Adipose
17 chr11:72554400-72567200 Weak transcription Brain Substantia Nigra brain
18 chr11:72554400-72574200 Weak transcription Aorta Aorta
19 chr11:72554400-72576000 Weak transcription Brain Cingulate Gyrus brain
20 chr11:72554600-72563200 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr11:72554600-72567000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr11:72554600-72567600 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr11:72554600-72567800 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr11:72554600-72568000 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr11:72554600-72570600 Weak transcription Colonic Mucosa Colon
26 chr11:72554600-72577000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr11:72554600-72577800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr11:72554600-72580400 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr11:72554600-72595800 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr11:72554600-72596600 Weak transcription Fetal Brain Female brain
31 chr11:72554800-72567200 Weak transcription Colon Smooth Muscle Colon
32 chr11:72554800-72578000 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr11:72554800-72578200 Weak transcription Duodenum Mucosa Duodenum
34 chr11:72555400-72568000 Weak transcription NHLF lung
35 chr11:72555600-72567200 Weak transcription Brain Inferior Temporal Lobe brain
36 chr11:72555600-72567600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr11:72555600-72567800 Weak transcription Fetal Brain Male brain
38 chr11:72555600-72575200 Weak transcription Right Ventricle heart
39 chr11:72555600-72586400 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr11:72555800-72567000 Weak transcription Brain Anterior Caudate brain
41 chr11:72555800-72567000 Weak transcription Fetal Intestine Small intestine
42 chr11:72555800-72574000 Weak transcription Left Ventricle heart
43 chr11:72555800-72580600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr11:72555800-72595600 Weak transcription Thymus Thymus
45 chr11:72556000-72567000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr11:72556000-72586400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr11:72556200-72566600 Weak transcription Fetal Heart heart
48 chr11:72556200-72567000 Weak transcription Fetal Stomach stomach
49 chr11:72556200-72572800 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr11:72556200-72576600 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015