Variant report

Variant rs394170
Chromosome Location chr5:79784184-79784185
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79782200-79785000 Active TSS Pancreatic Islets Pancreatic Islet
2 chr5:79782400-79784800 Flanking Active TSS Dnd41 blood
3 chr5:79782800-79784600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr5:79782800-79784600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
5 chr5:79782800-79784600 Active TSS Stomach Mucosa stomach
6 chr5:79783000-79784200 Active TSS Primary hematopoietic stem cells short term culture blood
7 chr5:79783000-79784600 Active TSS HUES48 Cell Line embryonic stem cell
8 chr5:79783000-79784600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr5:79783000-79784600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
10 chr5:79783000-79784600 Active TSS Brain Cingulate Gyrus brain
11 chr5:79783000-79784600 Active TSS Duodenum Smooth Muscle Duodenum
12 chr5:79783000-79784800 Active TSS Breast Myoepithelial Primary Cells Breast
13 chr5:79783000-79784800 Active TSS A549 lung
14 chr5:79783000-79785000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr5:79783000-79785200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr5:79783200-79784200 Active TSS Stomach Smooth Muscle stomach
17 chr5:79783200-79784200 Active TSS HMEC breast
18 chr5:79783200-79784400 Active TSS HSMM muscle
19 chr5:79783200-79784600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr5:79783200-79784600 Active TSS HUES64 Cell Line embryonic stem cell
21 chr5:79783200-79784600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
22 chr5:79783200-79784600 Active TSS Brain Hippocampus Middle brain
23 chr5:79783200-79784600 Active TSS Colonic Mucosa Colon
24 chr5:79783200-79784600 Active TSS Pancreas Pancrea
25 chr5:79783200-79784800 Active TSS H1 Cell Line embryonic stem cell
26 chr5:79783200-79784800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr5:79783200-79784800 Active TSS HUES6 Cell Line embryonic stem cell
28 chr5:79783200-79784800 Active TSS iPS-18 Cell Line embryonic stem cell
29 chr5:79783200-79784800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr5:79783200-79784800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr5:79783200-79784800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
32 chr5:79783200-79784800 Active TSS Fetal Brain Female brain
33 chr5:79783200-79784800 Active TSS Fetal Intestine Large intestine
34 chr5:79783200-79785200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr5:79783200-79785400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
36 chr5:79783200-79786000 Active TSS Rectal Mucosa Donor 29 rectum
37 chr5:79783400-79784200 Active TSS Primary T helper 17 cells PMA-I stimulated --
38 chr5:79783400-79784200 Active TSS Primary T killer naive cells fromperipheralblood blood
39 chr5:79783400-79784400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
40 chr5:79783400-79784400 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
41 chr5:79783400-79784400 Active TSS Primary T helper naive cells from peripheral blood blood
42 chr5:79783400-79784400 Active TSS Primary T killer memory cells from peripheral blood blood
43 chr5:79783400-79784400 Active TSS Muscle Satellite Cultured Cells --
44 chr5:79783400-79784400 Active TSS Colon Smooth Muscle Colon
45 chr5:79783400-79784400 Active TSS Placenta Amnion Placenta Amnion
46 chr5:79783400-79784400 Active TSS Sigmoid Colon Sigmoid Colon
47 chr5:79783400-79784400 Active TSS Small Intestine intestine
48 chr5:79783400-79784400 Active TSS Thymus Thymus
49 chr5:79783400-79784400 Flanking Active TSS GM12878-XiMat blood
50 chr5:79783400-79784600 Active TSS ES-WA7 Cell Line embryonic stem cell

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