Variant report

Variant rs171596
Chromosome Location chr5:79782530-79782531
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79733400-79782600 Weak transcription NHLF lung
2 chr5:79744800-79783200 Weak transcription Colonic Mucosa Colon
3 chr5:79759400-79782800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr5:79765600-79783400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr5:79766600-79782600 Weak transcription Fetal Heart heart
6 chr5:79766600-79783400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr5:79766800-79782800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr5:79767800-79783600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:79768200-79782600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr5:79768200-79782800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr5:79768200-79783400 Weak transcription HSMMtube muscle
12 chr5:79768400-79783400 Weak transcription Rectal Smooth Muscle rectum
13 chr5:79771000-79782800 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr5:79771200-79782600 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr5:79771200-79783000 Weak transcription NH-A brain
16 chr5:79771400-79782800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr5:79771400-79783000 Weak transcription Fetal Brain Male brain
18 chr5:79771600-79782600 Weak transcription Primary T cells from cord blood blood
19 chr5:79771600-79783400 Weak transcription Muscle Satellite Cultured Cells --
20 chr5:79771600-79783400 Weak transcription NHDF-Ad bronchial
21 chr5:79772000-79782800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr5:79772000-79783200 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr5:79772000-79783200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr5:79772000-79783400 Weak transcription Left Ventricle heart
25 chr5:79772000-79783400 Weak transcription HUVEC blood vessel
26 chr5:79772400-79783400 Weak transcription Psoas Muscle Psoas
27 chr5:79772400-79783400 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr5:79775800-79782800 Weak transcription HMEC breast
29 chr5:79775800-79782800 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr5:79776000-79782800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr5:79776000-79783000 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr5:79776600-79782800 Weak transcription Stomach Mucosa stomach
33 chr5:79777000-79782800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr5:79777200-79782800 Weak transcription NHEK skin
35 chr5:79777200-79783200 Weak transcription HSMM muscle
36 chr5:79777200-79783400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr5:79777400-79782800 Weak transcription Colon Smooth Muscle Colon
38 chr5:79777400-79783400 Weak transcription Ovary ovary
39 chr5:79777400-79783600 Weak transcription Aorta Aorta
40 chr5:79778400-79782600 Weak transcription Brain Anterior Caudate brain
41 chr5:79779600-79782800 Weak transcription Liver Liver
42 chr5:79779800-79782600 Weak transcription Brain Hippocampus Middle brain
43 chr5:79779800-79782800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr5:79779800-79783000 Weak transcription Duodenum Mucosa Duodenum
45 chr5:79779800-79783000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr5:79779800-79783200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr5:79779800-79783200 Weak transcription Stomach Smooth Muscle stomach
48 chr5:79779800-79783400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr5:79779800-79783600 Weak transcription Gastric stomach
50 chr5:79780000-79782600 Weak transcription Brain Angular Gyrus brain

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