Variant report

Variant rs2544600
Chromosome Location chr5:79733079-79733080
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79704600-79758000 Weak transcription Spleen Spleen
2 chr5:79704600-79758600 Weak transcription Gastric stomach
3 chr5:79705600-79757400 Weak transcription H9 Cell Line embryonic stem cell
4 chr5:79707800-79735400 Weak transcription Hela-S3 cervix
5 chr5:79708000-79738200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr5:79708000-79739200 Weak transcription Right Ventricle heart
7 chr5:79720400-79743200 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr5:79722400-79733400 Weak transcription H1 Cell Line embryonic stem cell
9 chr5:79722600-79765400 Weak transcription Fetal Brain Male brain
10 chr5:79724200-79757400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr5:79726800-79741800 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr5:79728800-79739000 Weak transcription Brain Cingulate Gyrus brain
13 chr5:79729800-79752800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr5:79730000-79734200 Strong transcription Cortex derived primary cultured neurospheres brain
15 chr5:79730000-79737200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr5:79730000-79750600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr5:79730000-79756400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr5:79730000-79757000 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr5:79730200-79734000 Strong transcription Liver Liver
20 chr5:79730200-79734000 Strong transcription Brain Anterior Caudate brain
21 chr5:79730200-79734000 Strong transcription Duodenum Smooth Muscle Duodenum
22 chr5:79730200-79734600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr5:79730200-79734800 Strong transcription Fetal Muscle Trunk muscle
24 chr5:79730200-79736000 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr5:79730200-79739000 Weak transcription Colonic Mucosa Colon
26 chr5:79730200-79739000 Weak transcription Rectal Smooth Muscle rectum
27 chr5:79730200-79750000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr5:79730200-79751800 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr5:79730200-79761400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr5:79730200-79762200 Weak transcription Stomach Mucosa stomach
31 chr5:79730400-79733400 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr5:79730400-79735400 Strong transcription Fetal Muscle Leg muscle
33 chr5:79730400-79736600 Weak transcription Psoas Muscle Psoas
34 chr5:79730600-79736400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr5:79730600-79740600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr5:79730600-79757200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr5:79730600-79762200 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr5:79731000-79734800 Strong transcription Fetal Intestine Large intestine
39 chr5:79731200-79734000 Strong transcription Primary B cells from peripheral blood blood
40 chr5:79731200-79734000 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr5:79731200-79734200 Strong transcription Stomach Smooth Muscle stomach
42 chr5:79731200-79734800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr5:79731200-79735400 Strong transcription Primary T cells from cord blood blood
44 chr5:79731200-79737400 Strong transcription Placenta Placenta
45 chr5:79731200-79749400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr5:79731400-79733600 Strong transcription Colon Smooth Muscle Colon
47 chr5:79731400-79733800 Strong transcription Duodenum Mucosa Duodenum
48 chr5:79731400-79733800 Strong transcription Ovary ovary
49 chr5:79731400-79734200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr5:79731400-79734200 Strong transcription Brain Substantia Nigra brain

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