The 2.0 version of rSNPBase

Variant report

Variant rs1820119
Chromosome Location chr5:79737412-79737413
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79704600-79758000 Weak transcription Spleen Spleen
2 chr5:79704600-79758600 Weak transcription Gastric stomach
3 chr5:79705600-79757400 Weak transcription H9 Cell Line embryonic stem cell
4 chr5:79708000-79738200 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr5:79708000-79739200 Weak transcription Right Ventricle heart
6 chr5:79720400-79743200 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr5:79722600-79765400 Weak transcription Fetal Brain Male brain
8 chr5:79724200-79757400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:79726800-79741800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr5:79728800-79739000 Weak transcription Brain Cingulate Gyrus brain
11 chr5:79729800-79752800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr5:79730000-79750600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr5:79730000-79756400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr5:79730000-79757000 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr5:79730200-79739000 Weak transcription Colonic Mucosa Colon
16 chr5:79730200-79739000 Weak transcription Rectal Smooth Muscle rectum
17 chr5:79730200-79750000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr5:79730200-79751800 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr5:79730200-79761400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr5:79730200-79762200 Weak transcription Stomach Mucosa stomach
21 chr5:79730600-79740600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr5:79730600-79757200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr5:79730600-79762200 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr5:79731200-79749400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr5:79731400-79748000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr5:79731400-79768000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr5:79731600-79741600 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr5:79731600-79750000 Strong transcription Primary monocytes fromperipheralblood blood
29 chr5:79731600-79758400 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr5:79731800-79739200 Weak transcription Fetal Intestine Small intestine
31 chr5:79731800-79747000 Strong transcription Breast Myoepithelial Primary Cells Breast
32 chr5:79732000-79738400 Strong transcription HUVEC blood vessel
33 chr5:79732200-79738000 Weak transcription Fetal Stomach stomach
34 chr5:79732200-79738000 Weak transcription Fetal Thymus thymus
35 chr5:79732200-79739000 Weak transcription Lung lung
36 chr5:79732200-79739200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr5:79732200-79739200 Weak transcription Aorta Aorta
38 chr5:79732200-79739200 Weak transcription Thymus Thymus
39 chr5:79732200-79741400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr5:79732200-79746600 Weak transcription Pancreas Pancrea
41 chr5:79732200-79757400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr5:79732200-79757800 Weak transcription NHEK skin
43 chr5:79732200-79758600 Weak transcription Esophagus oesophagus
44 chr5:79732200-79766200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr5:79732400-79743000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr5:79732400-79758200 Weak transcription Small Intestine intestine
47 chr5:79732600-79738200 Weak transcription Fetal Heart heart
48 chr5:79732800-79738000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr5:79732800-79738000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr5:79732800-79739000 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015