Variant report

Variant	rs4072993
Chromosome Location	chr8:59169071-59169072
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10098029	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10099695	0.87[ASN][1000 genomes]
rs10108483	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10435569	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10808692	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12550314	0.89[ASN][1000 genomes]
rs2925657	0.98[ASN][1000 genomes]
rs2925660	0.89[ASN][1000 genomes]
rs2925666	0.87[ASN][1000 genomes]
rs2925671	0.98[ASN][1000 genomes]
rs2970740	0.98[ASN][1000 genomes]
rs2970741	0.98[ASN][1000 genomes]
rs2970754	0.90[ASN][1000 genomes]
rs2970755	0.83[ASN][1000 genomes]
rs2970756	0.87[ASN][1000 genomes]
rs2970758	0.89[ASN][1000 genomes]
rs2970765	0.89[ASN][1000 genomes]
rs2970766	0.89[ASN][1000 genomes]
rs36073271	0.82[AFR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4237027	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4237028	0.98[ASN][1000 genomes]
rs4259404	0.98[ASN][1000 genomes]
rs4298479	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.88[YRI][hapmap];0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4336601	0.98[ASN][1000 genomes]
rs4342578	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4373506	0.98[ASN][1000 genomes]
rs4385457	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4406384	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4478561	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4526346	0.98[ASN][1000 genomes]
rs4538862	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4562301	0.96[ASN][1000 genomes]
rs4563874	0.98[ASN][1000 genomes]
rs4737492	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4738657	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4738658	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4738661	0.98[ASN][1000 genomes]
rs4738662	0.98[ASN][1000 genomes]
rs4738664	0.98[ASN][1000 genomes]
rs60231854	0.96[ASN][1000 genomes]
rs60422963	0.96[ASN][1000 genomes]
rs6471697	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6471699	0.98[ASN][1000 genomes]
rs6471701	0.98[ASN][1000 genomes]
rs6982876	0.98[ASN][1000 genomes]
rs6993120	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7002531	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7008300	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7008385	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7008471	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7010972	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs733665	0.87[ASN][1000 genomes]
rs7815702	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7821169	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs7829799	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7830292	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7845693	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9297988	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59162200-59170000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:59166600-59170400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr8:59167000-59170800	Enhancers	Fetal Lung	lung
4	chr8:59167400-59171000	Enhancers	Adipose Nuclei	Adipose
5	chr8:59167400-59171800	Enhancers	Brain Germinal Matrix	brain
6	chr8:59167400-59172200	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr8:59167600-59170800	Enhancers	Fetal Stomach	stomach
8	chr8:59168400-59169200	Enhancers	Fetal Muscle Leg	muscle
9	chr8:59168400-59169200	Enhancers	Ovary	ovary
10	chr8:59168400-59170200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr8:59168600-59169600	Enhancers	Brain Anterior Caudate	brain
12	chr8:59168600-59169800	Weak transcription	Primary monocytes fromperipheralblood	blood
13	chr8:59168600-59169800	Enhancers	Brain Substantia Nigra	brain
14	chr8:59168600-59170800	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr8:59168600-59171000	Enhancers	Fetal Heart	heart
16	chr8:59168600-59171600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr8:59168800-59169200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr8:59168800-59169200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
19	chr8:59168800-59170200	Enhancers	Stomach Mucosa	stomach
20	chr8:59169000-59169200	Bivalent Enhancer	Primary T cells from cord blood	blood
21	chr8:59169000-59169200	Flanking Active TSS	Brain Angular Gyrus	brain
22	chr8:59169000-59169200	Enhancers	Fetal Brain Female	brain
23	chr8:59169000-59169400	Flanking Active TSS	Brain Cingulate Gyrus	brain
24	chr8:59169000-59169400	Flanking Active TSS	Brain Hippocampus Middle	brain
25	chr8:59169000-59169600	Enhancers	HSMMtube	muscle
26	chr8:59169000-59170200	Enhancers	HMEC	breast
27	chr8:59169000-59170400	Enhancers	Primary T killer memory cells from peripheral blood	blood
28	chr8:59169000-59170800	Enhancers	Duodenum Smooth Muscle	Duodenum
29	chr8:59169000-59170800	Enhancers	HSMM	muscle
30	chr8:59169000-59171000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr8:59169000-59172200	Enhancers	Brain Inferior Temporal Lobe	brain

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