Variant report

Variant	rs4738657
Chromosome Location	chr8:59192014-59192015
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs10098029	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10099695	0.89[ASN][1000 genomes]
rs10108483	0.99[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10435569	0.99[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10808692	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12550314	0.91[ASN][1000 genomes]
rs1551544	0.81[ASN][1000 genomes]
rs2925657	0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2925660	0.91[ASN][1000 genomes]
rs2925666	0.89[ASN][1000 genomes]
rs2925671	1.00[ASN][1000 genomes]
rs2970740	0.90[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2970741	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2970754	0.92[ASN][1000 genomes]
rs2970755	0.85[ASN][1000 genomes]
rs2970756	0.89[ASN][1000 genomes]
rs2970758	0.91[ASN][1000 genomes]
rs2970765	0.91[ASN][1000 genomes]
rs2970766	0.91[ASN][1000 genomes]
rs36073271	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4072993	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4237027	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4237028	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4259404	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4298479	0.89[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4336601	1.00[ASN][1000 genomes]
rs4342578	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4373506	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4385457	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4406384	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4478561	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4526346	0.95[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4538862	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4562301	0.92[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs4563874	0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4737492	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4738658	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4738661	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4738662	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4738664	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs60231854	0.94[ASN][1000 genomes]
rs60422963	0.94[ASN][1000 genomes]
rs6471697	0.98[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6471699	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6471701	1.00[ASN][1000 genomes]
rs6982876	1.00[ASN][1000 genomes]
rs6993120	0.89[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7002531	0.89[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7008300	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7008385	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7008471	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7010972	0.99[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs733665	0.89[ASN][1000 genomes]
rs7815702	0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7821169	0.89[EUR][1000 genomes]
rs7829799	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7830292	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7845693	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9297988	0.89[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59185400-59193200	Weak transcription	Spleen	Spleen
2	chr8:59185400-59195800	Weak transcription	Right Atrium	heart
3	chr8:59188200-59193400	Enhancers	Fetal Muscle Leg	muscle
4	chr8:59188400-59192200	Weak transcription	Brain Germinal Matrix	brain
5	chr8:59188400-59192200	Weak transcription	Fetal Lung	lung
6	chr8:59188800-59192600	Weak transcription	Adipose Nuclei	Adipose
7	chr8:59190000-59192800	Enhancers	Fetal Stomach	stomach
8	chr8:59190600-59192200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr8:59190800-59192200	Weak transcription	HSMM	muscle
10	chr8:59190800-59193000	Enhancers	Fetal Heart	heart
11	chr8:59191400-59192400	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr8:59191400-59192400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr8:59191400-59196000	Weak transcription	Gastric	stomach
14	chr8:59191600-59192200	Weak transcription	Lung	lung
15	chr8:59191600-59192400	Enhancers	Colon Smooth Muscle	Colon
16	chr8:59191600-59194600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr8:59191600-59195800	Weak transcription	Fetal Muscle Trunk	muscle
18	chr8:59191600-59196200	Weak transcription	Hela-S3	cervix
19	chr8:59191800-59192200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr8:59191800-59194200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr8:59192000-59192600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr8:59192000-59192600	Enhancers	Muscle Satellite Cultured Cells	--

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