Variant report

Variant	rs41413446
Chromosome Location	chr6:15790795-15790796
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:15788511..15792316-chr6:15794070..15797091,4	K562	blood:
2	chr6:15789517..15794468-chr6:16128845..16131804,5	K562	blood:
3	chr6:15789517..15791820-chr6:16129566..16131804,2	K562	blood:

Variant related genes	Relation type
ENSG00000007944	Chromatin interaction

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs11751763	1.00[ASN][1000 genomes]
rs11753586	1.00[ASN][1000 genomes]
rs13199464	1.00[ASN][1000 genomes]
rs16876746	1.00[ASN][1000 genomes]
rs1927582	1.00[CEU][hapmap];0.81[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1927583	1.00[CEU][hapmap];0.81[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1927584	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2181435	1.00[ASN][1000 genomes]
rs2206341	1.00[ASN][1000 genomes]
rs34030405	1.00[ASN][1000 genomes]
rs34080473	1.00[ASN][1000 genomes]
rs34669273	1.00[ASN][1000 genomes]
rs35110594	1.00[ASN][1000 genomes]
rs35835933	1.00[ASN][1000 genomes]
rs36212519	1.00[ASN][1000 genomes]
rs443804	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs4605871	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55638296	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55974491	1.00[ASN][1000 genomes]
rs56135160	1.00[ASN][1000 genomes]
rs56170994	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56213329	1.00[ASN][1000 genomes]
rs56328138	1.00[ASN][1000 genomes]
rs6459413	1.00[ASN][1000 genomes]
rs6913914	1.00[CEU][hapmap];0.88[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6914558	1.00[ASN][1000 genomes]
rs6918979	1.00[ASN][1000 genomes]
rs72823461	1.00[ASN][1000 genomes]
rs73724483	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7738190	1.00[ASN][1000 genomes]
rs7739825	1.00[ASN][1000 genomes]
rs7760793	1.00[ASN][1000 genomes]
rs7772242	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7776332	1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15785600-15791200	Weak transcription	Gastric	stomach
2	chr6:15790600-15791000	Weak transcription	Psoas Muscle	Psoas
3	chr6:15790600-15792200	Enhancers	Fetal Brain Female	brain
4	chr6:15790600-15793600	Enhancers	Fetal Intestine Small	intestine
5	chr6:15790600-15794600	Enhancers	Fetal Intestine Large	intestine

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