Variant report

Variant	rs4270600
Chromosome Location	chr4:128165895-128165896
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10013046	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10518514	0.86[ASN][1000 genomes]
rs10518515	0.86[ASN][1000 genomes]
rs10518517	0.96[ASN][1000 genomes]
rs10518520	0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11098918	1.00[ASN][1000 genomes]
rs11098919	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1155135	0.82[ASN][1000 genomes]
rs12639943	0.88[ASN][1000 genomes]
rs12649568	0.96[ASN][1000 genomes]
rs1443067	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17012138	0.82[ASN][1000 genomes]
rs17012147	0.84[ASN][1000 genomes]
rs17012149	0.84[ASN][1000 genomes]
rs17012312	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17012314	0.82[ASN][1000 genomes]
rs17012316	0.82[ASN][1000 genomes]
rs28493833	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs28798206	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35767037	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4274865	0.85[ASN][1000 genomes]
rs4306971	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56786523	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57081812	0.86[ASN][1000 genomes]
rs57701757	0.93[ASN][1000 genomes]
rs58916718	0.81[ASN][1000 genomes]
rs59218603	0.84[ASN][1000 genomes]
rs59789711	0.98[ASN][1000 genomes]
rs61513058	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72929404	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72929408	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72929409	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72929411	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72929490	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72929494	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs755815	0.93[ASN][1000 genomes]
rs7660722	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031024	chr4:128152969-128264539	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128162400-128167000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr4:128162600-128170000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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