Variant report

Variant	rs12639943
Chromosome Location	chr4:128125716-128125717
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10013046	0.83[ASN][1000 genomes]
rs10518511	0.83[EUR][1000 genomes]
rs10518514	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10518515	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10518517	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10518520	0.90[ASN][1000 genomes]
rs11098918	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11098919	0.88[ASN][1000 genomes]
rs12649215	0.85[AMR][1000 genomes]
rs12649568	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12651138	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17011996	0.81[AMR][1000 genomes]
rs17012000	0.81[AMR][1000 genomes]
rs17012020	0.81[AMR][1000 genomes]
rs17012036	0.81[AMR][1000 genomes]
rs17012038	0.81[AMR][1000 genomes]
rs17012040	0.81[AMR][1000 genomes]
rs17012078	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17012138	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17012147	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17012149	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17012314	0.83[EUR][1000 genomes]
rs17012316	0.83[EUR][1000 genomes]
rs17012372	0.83[EUR][1000 genomes]
rs1822359	0.83[EUR][1000 genomes]
rs1871736	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs28798206	0.88[ASN][1000 genomes]
rs4270600	0.88[ASN][1000 genomes]
rs4274865	0.83[EUR][1000 genomes]
rs4306971	0.82[ASN][1000 genomes]
rs56786523	0.88[ASN][1000 genomes]
rs56822169	0.81[AMR][1000 genomes]
rs57081812	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57701757	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs58916718	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs59218603	0.83[EUR][1000 genomes]
rs59451076	0.83[EUR][1000 genomes]
rs59789711	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6831453	0.83[EUR][1000 genomes]
rs72925363	0.83[EUR][1000 genomes]
rs72929404	0.83[ASN][1000 genomes]
rs72929408	0.83[ASN][1000 genomes]
rs72929409	0.83[ASN][1000 genomes]
rs72929411	0.82[ASN][1000 genomes]
rs755815	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7657020	0.83[EUR][1000 genomes]
rs920737	0.83[EUR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128124200-128126200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr4:128124600-128125800	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr4:128124600-128125800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr4:128124800-128125800	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr4:128124800-128126200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr4:128125000-128125800	Enhancers	H9 Cell Line	embryonic stem cell
7	chr4:128125000-128125800	Enhancers	Osteobl	bone
8	chr4:128125000-128126000	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr4:128125000-128126000	Enhancers	NHDF-Ad	bronchial
10	chr4:128125200-128125800	Enhancers	H1 Cell Line	embryonic stem cell
11	chr4:128125200-128125800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr4:128125200-128125800	Enhancers	Fetal Muscle Leg	muscle
13	chr4:128125400-128126200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr4:128125400-128130600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr4:128125600-128125800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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