Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11855607	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs16958382	1.00[EUR][1000 genomes]
rs16958390	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16958415	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1869177	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2290346	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3935254	0.82[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs57180956	1.00[EUR][1000 genomes]
rs58309771	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58443873	1.00[EUR][1000 genomes]
rs58594871	1.00[EUR][1000 genomes]
rs59778825	0.94[ASN][1000 genomes]
rs60302365	1.00[EUR][1000 genomes]
rs60541198	0.83[ASN][1000 genomes]
rs60856646	0.94[ASN][1000 genomes]
rs61661320	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7178137	0.84[ASN][1000 genomes]
rs7178413	0.84[ASN][1000 genomes]
rs7179621	0.84[ASN][1000 genomes]
rs744619	0.87[ASN][1000 genomes]
rs8029844	0.82[AFR][1000 genomes]
rs8035582	0.83[AFR][1000 genomes]
rs878322	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043335	chr15:74078689-74241186	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74169200-74174200	Weak transcription	Fetal Intestine Large	intestine
2	chr15:74170400-74175200	Weak transcription	Fetal Intestine Small	intestine

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