The 2.0 version of rSNPBase

Variant report

Variant rs4655242
Chromosome Location chr1:214464883-214464884
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214455600-214487800 Weak transcription Primary B cells from cord blood blood
2 chr1:214455600-214489000 Weak transcription Ovary ovary
3 chr1:214456000-214469200 Weak transcription NH-A brain
4 chr1:214456200-214469800 Weak transcription Fetal Lung lung
5 chr1:214456400-214468800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:214456400-214470000 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:214456400-214491800 Weak transcription Pancreas Pancrea
8 chr1:214456600-214467800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:214456600-214483200 Weak transcription Primary B cells from peripheral blood blood
10 chr1:214456800-214465000 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr1:214456800-214465400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:214456800-214468800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:214456800-214470000 Weak transcription HMEC breast
14 chr1:214457200-214478200 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr1:214458600-214470000 Weak transcription A549 lung
16 chr1:214459200-214468200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:214459200-214469400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:214459200-214483000 Weak transcription Liver Liver
19 chr1:214459200-214491400 Weak transcription Duodenum Mucosa Duodenum
20 chr1:214459600-214468800 Weak transcription GM12878-XiMat blood
21 chr1:214459800-214467800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr1:214461400-214465600 Enhancers Fetal Heart heart
23 chr1:214461400-214475800 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:214461600-214475600 Weak transcription Primary T cells fromperipheralblood blood
25 chr1:214461600-214483000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:214461800-214468800 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr1:214461800-214482800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr1:214462000-214469200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:214462000-214469600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr1:214462000-214469600 Weak transcription Hela-S3 cervix
31 chr1:214462000-214471400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr1:214462000-214491800 Weak transcription NHEK skin
33 chr1:214462200-214466400 Enhancers Fetal Intestine Small intestine
34 chr1:214462400-214465200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
35 chr1:214462400-214470200 Weak transcription HSMMtube muscle
36 chr1:214462400-214475800 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr1:214462600-214465400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:214462600-214483200 Weak transcription Dnd41 blood
39 chr1:214462800-214465000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:214462800-214469000 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr1:214463200-214465000 Enhancers Skeletal Muscle Male skeletal muscle
42 chr1:214463200-214466000 Enhancers Skeletal Muscle Female skeletal muscle
43 chr1:214463200-214467600 Weak transcription Fetal Muscle Trunk muscle
44 chr1:214463200-214475800 Weak transcription Primary T cells from cord blood blood
45 chr1:214463400-214465200 Bivalent Enhancer H1 Cell Line embryonic stem cell
46 chr1:214463400-214465400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:214463400-214466000 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr1:214463400-214470400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr1:214463400-214478200 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr1:214463600-214465000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015