The 2.0 version of rSNPBase

Variant report

Variant rs6673096
Chromosome Location chr1:214510953-214510954
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214471000-214517400 Weak transcription Fetal Kidney kidney
2 chr1:214477400-214511000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr1:214484800-214522000 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:214485000-214513200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:214486200-214526000 Weak transcription Psoas Muscle Psoas
6 chr1:214488200-214517600 Weak transcription Brain Germinal Matrix brain
7 chr1:214488200-214520800 Weak transcription Hela-S3 cervix
8 chr1:214490800-214518200 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:214493000-214519800 Weak transcription Brain Hippocampus Middle brain
10 chr1:214493000-214534600 Weak transcription Brain Inferior Temporal Lobe brain
11 chr1:214493800-214519000 Weak transcription Fetal Thymus thymus
12 chr1:214501800-214512000 Strong transcription Primary T helper naive cells fromperipheralblood blood
13 chr1:214501800-214517800 Weak transcription Primary hematopoietic stem cells blood
14 chr1:214502600-214515000 Weak transcription Brain Angular Gyrus brain
15 chr1:214503200-214537800 Weak transcription Gastric stomach
16 chr1:214503400-214513000 Weak transcription K562 blood
17 chr1:214503400-214518400 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr1:214503600-214511000 Weak transcription Fetal Brain Female brain
19 chr1:214503600-214511200 Weak transcription Colonic Mucosa Colon
20 chr1:214503800-214515800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:214504400-214511000 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr1:214504600-214517600 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:214504600-214533200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr1:214504800-214512000 Weak transcription Primary B cells from cord blood blood
25 chr1:214505400-214512000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr1:214506600-214511600 Strong transcription Fetal Adrenal Gland Adrenal Gland
27 chr1:214506800-214512600 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr1:214506800-214513200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:214506800-214514600 Weak transcription A549 lung
30 chr1:214507000-214517400 Weak transcription HUVEC blood vessel
31 chr1:214507000-214529800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:214507200-214512000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr1:214507400-214511200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:214507400-214511200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:214507400-214511200 Strong transcription Osteobl bone
36 chr1:214508000-214517200 Weak transcription Fetal Lung lung
37 chr1:214508000-214517400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr1:214508000-214517400 Weak transcription NHLF lung
39 chr1:214508200-214514200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:214508400-214511000 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr1:214508400-214511000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr1:214508400-214517200 Weak transcription Placenta Placenta
43 chr1:214508400-214517800 Weak transcription Primary B cells from peripheral blood blood
44 chr1:214508400-214520000 Weak transcription Thymus Thymus
45 chr1:214508400-214524600 Weak transcription Lung lung
46 chr1:214508400-214524800 Weak transcription Spleen Spleen
47 chr1:214508400-214529600 Weak transcription Pancreas Pancrea
48 chr1:214508400-214535000 Weak transcription Esophagus oesophagus
49 chr1:214508600-214511000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:214508600-214512400 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015