The 2.0 version of rSNPBase

Variant report

Variant rs6419473
Chromosome Location chr1:214458735-214458736
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214455400-214463200 Weak transcription Lung lung
2 chr1:214455600-214487800 Weak transcription Primary B cells from cord blood blood
3 chr1:214455600-214489000 Weak transcription Ovary ovary
4 chr1:214455800-214463200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr1:214456000-214458800 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:214456000-214469200 Weak transcription NH-A brain
7 chr1:214456200-214459000 Weak transcription Gastric stomach
8 chr1:214456200-214459200 Enhancers Primary T helper cells PMA-I stimulated --
9 chr1:214456200-214462400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:214456200-214463000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:214456200-214463800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr1:214456200-214469800 Weak transcription Fetal Lung lung
13 chr1:214456400-214459400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr1:214456400-214463000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:214456400-214463000 Weak transcription Psoas Muscle Psoas
16 chr1:214456400-214463000 Weak transcription Right Atrium heart
17 chr1:214456400-214468800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:214456400-214470000 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:214456400-214491800 Weak transcription Pancreas Pancrea
20 chr1:214456600-214459000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:214456600-214459000 Weak transcription Thymus Thymus
22 chr1:214456600-214459200 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr1:214456600-214460800 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr1:214456600-214461200 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr1:214456600-214461200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:214456600-214463000 Weak transcription Fetal Muscle Leg muscle
27 chr1:214456600-214463000 Weak transcription Left Ventricle heart
28 chr1:214456600-214467800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:214456600-214483200 Weak transcription Primary B cells from peripheral blood blood
30 chr1:214456800-214461200 Weak transcription Primary T cells fromperipheralblood blood
31 chr1:214456800-214461400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr1:214456800-214463000 Weak transcription Spleen Spleen
33 chr1:214456800-214465000 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:214456800-214465400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:214456800-214468800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:214456800-214470000 Weak transcription HMEC breast
37 chr1:214457200-214459200 Weak transcription Dnd41 blood
38 chr1:214457200-214461200 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr1:214457200-214461400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr1:214457200-214461400 Weak transcription Hela-S3 cervix
41 chr1:214457200-214463000 Weak transcription Right Ventricle heart
42 chr1:214457200-214478200 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr1:214457800-214459200 Enhancers Liver Liver
44 chr1:214457800-214459600 Flanking Active TSS HepG2 liver
45 chr1:214458200-214458800 Enhancers ES-I3 Cell Line embryonic stem cell
46 chr1:214458200-214458800 Enhancers HUES6 Cell Line embryonic stem cell
47 chr1:214458200-214458800 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
48 chr1:214458200-214458800 Enhancers Primary T helper cells fromperipheralblood blood
49 chr1:214458200-214459200 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr1:214458200-214459200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015