The 2.0 version of rSNPBase

Variant report

Variant rs2270704
Chromosome Location chr1:214504604-214504605
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214471000-214517400 Weak transcription Fetal Kidney kidney
2 chr1:214477400-214506400 Weak transcription Colon Smooth Muscle Colon
3 chr1:214477400-214506400 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:214477400-214511000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:214482200-214510600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:214484400-214510800 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr1:214484800-214507800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr1:214484800-214522000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:214485000-214506400 Weak transcription Rectal Smooth Muscle rectum
10 chr1:214485000-214513200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:214486200-214526000 Weak transcription Psoas Muscle Psoas
12 chr1:214487400-214509400 Strong transcription Primary T cells from cord blood blood
13 chr1:214487600-214506200 Weak transcription Small Intestine intestine
14 chr1:214487800-214510600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:214488200-214517600 Weak transcription Brain Germinal Matrix brain
16 chr1:214488200-214520800 Weak transcription Hela-S3 cervix
17 chr1:214488800-214510600 Weak transcription Fetal Brain Male brain
18 chr1:214489400-214506200 Weak transcription A549 lung
19 chr1:214489400-214506600 Weak transcription Ovary ovary
20 chr1:214490800-214518200 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr1:214491600-214506000 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr1:214492800-214509200 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr1:214493000-214505400 Weak transcription HMEC breast
24 chr1:214493000-214510600 Weak transcription Aorta Aorta
25 chr1:214493000-214519800 Weak transcription Brain Hippocampus Middle brain
26 chr1:214493000-214534600 Weak transcription Brain Inferior Temporal Lobe brain
27 chr1:214493400-214508600 Strong transcription HepG2 liver
28 chr1:214493800-214519000 Weak transcription Fetal Thymus thymus
29 chr1:214495400-214507400 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr1:214495600-214510400 Weak transcription NH-A brain
31 chr1:214497800-214509000 Strong transcription Dnd41 blood
32 chr1:214498200-214504800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr1:214499400-214504800 Strong transcription Primary T helper cells fromperipheralblood blood
34 chr1:214499600-214506200 Strong transcription Fetal Stomach stomach
35 chr1:214499800-214506200 Strong transcription Fetal Intestine Large intestine
36 chr1:214500000-214508800 Strong transcription Fetal Intestine Small intestine
37 chr1:214500200-214507200 Weak transcription Primary monocytes fromperipheralblood blood
38 chr1:214500200-214510000 Weak transcription GM12878-XiMat blood
39 chr1:214500800-214504800 Strong transcription Primary B cells from cord blood blood
40 chr1:214501000-214506000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
41 chr1:214501400-214505400 Strong transcription Primary T helper cells PMA-I stimulated --
42 chr1:214501800-214512000 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr1:214501800-214517800 Weak transcription Primary hematopoietic stem cells blood
44 chr1:214502000-214506800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:214502200-214506400 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr1:214502200-214506600 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr1:214502600-214504800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:214502600-214504800 Enhancers Esophagus oesophagus
49 chr1:214502600-214505200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:214502600-214505400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015