The 2.0 version of rSNPBase

Variant report

Variant rs6662275
Chromosome Location chr1:214481045-214481046
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214455600-214487800 Weak transcription Primary B cells from cord blood blood
2 chr1:214455600-214489000 Weak transcription Ovary ovary
3 chr1:214456400-214491800 Weak transcription Pancreas Pancrea
4 chr1:214456600-214483200 Weak transcription Primary B cells from peripheral blood blood
5 chr1:214459200-214483000 Weak transcription Liver Liver
6 chr1:214459200-214491400 Weak transcription Duodenum Mucosa Duodenum
7 chr1:214461600-214483000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr1:214461800-214482800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:214462000-214491800 Weak transcription NHEK skin
10 chr1:214462600-214483200 Weak transcription Dnd41 blood
11 chr1:214469400-214488600 Weak transcription Fetal Thymus thymus
12 chr1:214469600-214482200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:214469600-214488400 Weak transcription Thymus Thymus
14 chr1:214470600-214481600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:214470600-214482400 Weak transcription GM12878-XiMat blood
16 chr1:214470600-214488400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:214470600-214488800 Weak transcription HMEC breast
18 chr1:214471000-214488000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:214471000-214489000 Weak transcription A549 lung
20 chr1:214471000-214489400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:214471000-214517400 Weak transcription Fetal Kidney kidney
22 chr1:214471200-214484600 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:214471400-214484400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:214476000-214483000 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr1:214476000-214483200 Weak transcription Primary T cells fromperipheralblood blood
26 chr1:214476000-214483200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr1:214476200-214482200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr1:214476200-214483400 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr1:214476600-214492200 Weak transcription K562 blood
30 chr1:214476800-214481600 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr1:214476800-214483000 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr1:214476800-214483000 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr1:214477000-214484600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr1:214477000-214489800 Weak transcription NH-A brain
35 chr1:214477200-214483000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:214477200-214483200 Weak transcription Fetal Lung lung
37 chr1:214477200-214486000 Weak transcription Right Atrium heart
38 chr1:214477200-214487000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:214477200-214491600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr1:214477200-214492200 Weak transcription Aorta Aorta
41 chr1:214477400-214483200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr1:214477400-214483200 Weak transcription Adipose Nuclei Adipose
43 chr1:214477400-214487600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:214477400-214489800 Weak transcription NHLF lung
45 chr1:214477400-214492200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:214477400-214506400 Weak transcription Colon Smooth Muscle Colon
47 chr1:214477400-214506400 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:214477400-214511000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr1:214477600-214483200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:214477600-214484800 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015