Variant report

Variant rs470102
Chromosome Location chr22:28397720-28397721
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:28369200-28398400 Weak transcription Hela-S3 cervix
2 chr22:28373600-28404000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr22:28373800-28398200 Strong transcription Fetal Brain Female brain
4 chr22:28373800-28404200 Strong transcription Fetal Stomach stomach
5 chr22:28373800-28405200 Strong transcription Fetal Intestine Small intestine
6 chr22:28377800-28398000 Strong transcription Fetal Intestine Large intestine
7 chr22:28377800-28398600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr22:28379400-28399600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr22:28381800-28412400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr22:28384000-28405000 Weak transcription Placenta Amnion Placenta Amnion
11 chr22:28384200-28399400 Weak transcription Primary hematopoietic stem cells blood
12 chr22:28384800-28401600 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr22:28386200-28405800 Strong transcription Dnd41 blood
14 chr22:28386200-28416000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr22:28387400-28405200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr22:28387600-28398200 Strong transcription Stomach Smooth Muscle stomach
17 chr22:28387600-28405000 Weak transcription Fetal Kidney kidney
18 chr22:28387800-28399000 Strong transcription Fetal Muscle Trunk muscle
19 chr22:28387800-28399200 Strong transcription Fetal Muscle Leg muscle
20 chr22:28388400-28400600 Weak transcription Thymus Thymus
21 chr22:28388800-28399800 Weak transcription HSMMtube muscle
22 chr22:28389200-28410000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr22:28389200-28413000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr22:28390000-28414600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr22:28390400-28416200 Weak transcription Colonic Mucosa Colon
26 chr22:28391200-28402400 Strong transcription Fetal Adrenal Gland Adrenal Gland
27 chr22:28392200-28405200 Weak transcription Brain Inferior Temporal Lobe brain
28 chr22:28392600-28398000 Strong transcription Fetal Lung lung
29 chr22:28393000-28398000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr22:28393400-28398200 Strong transcription Brain Germinal Matrix brain
31 chr22:28393400-28408800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr22:28394000-28398200 Strong transcription Adipose Nuclei Adipose
33 chr22:28394200-28398000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr22:28394200-28400600 Weak transcription HSMM muscle
35 chr22:28394200-28401000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr22:28394200-28405000 Weak transcription Fetal Brain Male brain
37 chr22:28394200-28405000 Weak transcription NHDF-Ad bronchial
38 chr22:28394400-28398600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr22:28394400-28400400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr22:28394600-28402600 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr22:28394800-28398200 Weak transcription Liver Liver
42 chr22:28394800-28414000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr22:28395000-28398600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr22:28395000-28416400 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr22:28395200-28398200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr22:28395200-28405000 Weak transcription Brain Substantia Nigra brain
47 chr22:28395200-28405200 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr22:28395200-28409200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr22:28395400-28403400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr22:28395400-28404600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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