Variant report

Variant rs9620769
Chromosome Location chr22:28502867-28502868
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:28466600-28503600 Weak transcription Hela-S3 cervix
2 chr22:28485800-28508600 Weak transcription Brain Substantia Nigra brain
3 chr22:28486000-28507200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr22:28486200-28504400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr22:28486200-28504800 Weak transcription Osteobl bone
6 chr22:28486400-28508600 Weak transcription Psoas Muscle Psoas
7 chr22:28487600-28504400 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr22:28487600-28517200 Weak transcription Primary hematopoietic stem cells blood
9 chr22:28487800-28505000 Weak transcription Colonic Mucosa Colon
10 chr22:28489000-28508200 Weak transcription Rectal Smooth Muscle rectum
11 chr22:28489800-28508400 Weak transcription Small Intestine intestine
12 chr22:28490600-28504400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr22:28491200-28503000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr22:28492600-28503200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr22:28493600-28504200 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr22:28494400-28503800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr22:28495000-28504000 Weak transcription Fetal Brain Male brain
18 chr22:28495000-28507600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr22:28495000-28508400 Weak transcription Brain Inferior Temporal Lobe brain
20 chr22:28495000-28508400 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr22:28495000-28508600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr22:28495200-28508600 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr22:28495600-28503000 Weak transcription Liver Liver
24 chr22:28496000-28505600 Weak transcription Primary T cells from cord blood blood
25 chr22:28496600-28517200 Weak transcription Duodenum Mucosa Duodenum
26 chr22:28497200-28508600 Weak transcription Stomach Mucosa stomach
27 chr22:28497400-28504200 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr22:28498000-28503000 Weak transcription Aorta Aorta
29 chr22:28498200-28510800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr22:28499600-28503400 Weak transcription NHLF lung
31 chr22:28499800-28505400 Weak transcription HUVEC blood vessel
32 chr22:28499800-28508400 Weak transcription HSMMtube muscle
33 chr22:28500000-28504000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr22:28500000-28504400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr22:28500000-28504400 Strong transcription Fetal Adrenal Gland Adrenal Gland
36 chr22:28500000-28507600 Weak transcription HSMM muscle
37 chr22:28500000-28507800 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr22:28500000-28507800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr22:28500200-28503200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr22:28500200-28504200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr22:28500200-28504400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr22:28500200-28508400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr22:28500400-28504000 Weak transcription H1 Cell Line embryonic stem cell
44 chr22:28500400-28504400 Strong transcription Fetal Stomach stomach
45 chr22:28500400-28507800 Weak transcription Muscle Satellite Cultured Cells --
46 chr22:28500400-28508600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr22:28500600-28504200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr22:28500600-28504400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr22:28500800-28504000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr22:28501000-28503000 Enhancers Fetal Heart heart

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