Variant report

Variant rs16985967
Chromosome Location chr22:28487192-28487193
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:28449600-28488200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr22:28466400-28489800 Weak transcription Fetal Brain Male brain
3 chr22:28466600-28503600 Weak transcription Hela-S3 cervix
4 chr22:28468600-28489800 Weak transcription Fetal Kidney kidney
5 chr22:28471600-28487400 Weak transcription Brain Hippocampus Middle brain
6 chr22:28471600-28491800 Weak transcription Stomach Smooth Muscle stomach
7 chr22:28471800-28488400 Weak transcription Left Ventricle heart
8 chr22:28471800-28491400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr22:28471800-28492000 Weak transcription Aorta Aorta
10 chr22:28472000-28487400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr22:28472000-28489600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr22:28472000-28489800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr22:28472000-28494800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr22:28472000-28499000 Weak transcription NHDF-Ad bronchial
15 chr22:28472200-28498600 Weak transcription Colon Smooth Muscle Colon
16 chr22:28472400-28494200 Weak transcription Duodenum Mucosa Duodenum
17 chr22:28472800-28495400 Weak transcription Pancreas Pancrea
18 chr22:28472800-28501000 Weak transcription Gastric stomach
19 chr22:28474000-28488600 Weak transcription Fetal Lung lung
20 chr22:28475200-28489800 Weak transcription Fetal Heart heart
21 chr22:28475400-28487400 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr22:28480200-28487400 Weak transcription Fetal Muscle Trunk muscle
23 chr22:28480200-28493600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr22:28480400-28487400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr22:28480400-28487400 Weak transcription Fetal Stomach stomach
26 chr22:28480400-28487400 Weak transcription Ovary ovary
27 chr22:28480400-28490000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr22:28480400-28490000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr22:28480400-28490000 Weak transcription Brain Germinal Matrix brain
30 chr22:28480400-28492000 Weak transcription Fetal Intestine Small intestine
31 chr22:28480400-28494000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr22:28481000-28487400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr22:28483600-28500000 Weak transcription Spleen Spleen
34 chr22:28485000-28487400 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr22:28485600-28487800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr22:28485600-28494200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr22:28485600-28494600 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr22:28485800-28501400 Strong transcription Dnd41 blood
39 chr22:28485800-28508600 Weak transcription Brain Substantia Nigra brain
40 chr22:28486000-28492200 Weak transcription Lung lung
41 chr22:28486000-28507200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr22:28486200-28487600 Weak transcription Liver Liver
43 chr22:28486200-28489600 Weak transcription Primary T cells from cord blood blood
44 chr22:28486200-28504400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr22:28486200-28504800 Weak transcription Osteobl bone
46 chr22:28486400-28488000 Weak transcription Fetal Intestine Large intestine
47 chr22:28486400-28490000 Strong transcription Cortex derived primary cultured neurospheres brain
48 chr22:28486400-28494000 Weak transcription Right Ventricle heart
49 chr22:28486400-28508600 Weak transcription Psoas Muscle Psoas
50 chr22:28486600-28498400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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