Variant report

Variant rs10154425
Chromosome Location chr22:28493429-28493430
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:28466600-28503600 Weak transcription Hela-S3 cervix
2 chr22:28472000-28494800 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr22:28472000-28499000 Weak transcription NHDF-Ad bronchial
4 chr22:28472200-28498600 Weak transcription Colon Smooth Muscle Colon
5 chr22:28472400-28494200 Weak transcription Duodenum Mucosa Duodenum
6 chr22:28472800-28495400 Weak transcription Pancreas Pancrea
7 chr22:28472800-28501000 Weak transcription Gastric stomach
8 chr22:28480200-28493600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr22:28480400-28494000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr22:28483600-28500000 Weak transcription Spleen Spleen
11 chr22:28485600-28494200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr22:28485600-28494600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr22:28485800-28501400 Strong transcription Dnd41 blood
14 chr22:28485800-28508600 Weak transcription Brain Substantia Nigra brain
15 chr22:28486000-28507200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr22:28486200-28504400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr22:28486200-28504800 Weak transcription Osteobl bone
18 chr22:28486400-28494000 Weak transcription Right Ventricle heart
19 chr22:28486400-28508600 Weak transcription Psoas Muscle Psoas
20 chr22:28486600-28498400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr22:28486600-28499400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr22:28486600-28499400 Weak transcription Muscle Satellite Cultured Cells --
23 chr22:28486800-28494800 Weak transcription Brain Angular Gyrus brain
24 chr22:28486800-28498600 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr22:28487000-28496800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr22:28487400-28495200 Strong transcription Duodenum Smooth Muscle Duodenum
27 chr22:28487400-28497000 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr22:28487400-28501200 Strong transcription Fetal Muscle Trunk muscle
29 chr22:28487600-28504400 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr22:28487600-28517200 Weak transcription Primary hematopoietic stem cells blood
31 chr22:28487800-28505000 Weak transcription Colonic Mucosa Colon
32 chr22:28488200-28499400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr22:28488800-28493600 Weak transcription Brain Anterior Caudate brain
34 chr22:28488800-28493600 Weak transcription Brain Inferior Temporal Lobe brain
35 chr22:28488800-28501000 Weak transcription Brain Hippocampus Middle brain
36 chr22:28489000-28499400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr22:28489000-28508200 Weak transcription Rectal Smooth Muscle rectum
38 chr22:28489600-28500800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr22:28489800-28508400 Weak transcription Small Intestine intestine
40 chr22:28490000-28494000 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr22:28490200-28496600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr22:28490400-28494000 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr22:28490400-28494200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr22:28490400-28494200 Weak transcription Primary T cells from cord blood blood
45 chr22:28490400-28498600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr22:28490400-28499200 Strong transcription Fetal Muscle Leg muscle
47 chr22:28490400-28499400 Weak transcription HSMM muscle
48 chr22:28490400-28499400 Weak transcription HSMMtube muscle
49 chr22:28490600-28494200 Weak transcription Fetal Kidney kidney
50 chr22:28490600-28494600 Weak transcription Rectal Mucosa Donor 31 rectum

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