Variant report
Variant | rs4780186 |
---|---|
Chromosome Location | chr15:34152549-34152550 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr15:34121400-34158400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
2 | chr15:34130800-34158600 | Weak transcription | Brain Germinal Matrix | brain |
3 | chr15:34137400-34164200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
4 | chr15:34139800-34156400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
5 | chr15:34139800-34164200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
6 | chr15:34142400-34168600 | Weak transcription | Esophagus | oesophagus |
7 | chr15:34143000-34165000 | Weak transcription | Psoas Muscle | Psoas |
8 | chr15:34143400-34160400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
9 | chr15:34143600-34164200 | Weak transcription | Brain Angular Gyrus | brain |
10 | chr15:34143800-34156200 | Weak transcription | Rectal Smooth Muscle | rectum |
11 | chr15:34145000-34158200 | Weak transcription | Gastric | stomach |
12 | chr15:34145000-34161200 | Weak transcription | Small Intestine | intestine |
13 | chr15:34145400-34152800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
14 | chr15:34145400-34156600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
15 | chr15:34145600-34154200 | Strong transcription | Fetal Muscle Leg | muscle |
16 | chr15:34145600-34158200 | Weak transcription | Primary hematopoietic stem cells | blood |
17 | chr15:34145600-34158600 | Weak transcription | HSMM | muscle |
18 | chr15:34145800-34152800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
19 | chr15:34145800-34152800 | Weak transcription | Osteobl | bone |
20 | chr15:34145800-34153000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
21 | chr15:34145800-34158400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
22 | chr15:34146200-34153800 | Strong transcription | Stomach Smooth Muscle | stomach |
23 | chr15:34146400-34153200 | Strong transcription | Fetal Muscle Trunk | muscle |
24 | chr15:34146400-34158200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
25 | chr15:34146600-34153600 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
26 | chr15:34146800-34152600 | Strong transcription | Brain Anterior Caudate | brain |
27 | chr15:34146800-34152800 | Weak transcription | Hela-S3 | cervix |
28 | chr15:34146800-34164000 | Weak transcription | Right Ventricle | heart |
29 | chr15:34147200-34162400 | Weak transcription | Pancreas | Pancrea |
30 | chr15:34147400-34164200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
31 | chr15:34147600-34153000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
32 | chr15:34148000-34153000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
33 | chr15:34148400-34156600 | Weak transcription | GM12878-XiMat | blood |
34 | chr15:34148600-34155600 | Weak transcription | Brain Substantia Nigra | brain |
35 | chr15:34148600-34158400 | Weak transcription | Ovary | ovary |
36 | chr15:34148600-34159400 | Weak transcription | Lung | lung |
37 | chr15:34148800-34153000 | Weak transcription | NHDF-Ad | bronchial |
38 | chr15:34149400-34155400 | Strong transcription | Fetal Stomach | stomach |
39 | chr15:34149400-34156200 | Weak transcription | Primary B cells from cord blood | blood |
40 | chr15:34149400-34165800 | Weak transcription | Fetal Intestine Small | intestine |
41 | chr15:34149600-34157000 | Weak transcription | Fetal Intestine Large | intestine |
42 | chr15:34149600-34158400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
43 | chr15:34150200-34164000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
44 | chr15:34150200-34164000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
45 | chr15:34150800-34153200 | Strong transcription | Left Ventricle | heart |
46 | chr15:34150800-34167400 | Weak transcription | Duodenum Mucosa | Duodenum |
47 | chr15:34151000-34152600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
48 | chr15:34151000-34154000 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
49 | chr15:34151200-34152600 | Strong transcription | Liver | Liver |
50 | chr15:34151200-34152600 | Strong transcription | Colon Smooth Muscle | Colon |