Variant report
| Variant | rs4907100 |
|---|---|
| Chromosome Location | chr1:85272147-85272148 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:3 , 50 per page) page:
1
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:56)
| rs_ID | r2[population] |
|---|---|
| rs1077776 | 1.00[ASN][1000 genomes] |
| rs1077777 | 1.00[ASN][1000 genomes] |
| rs1325274 | 1.00[ASN][1000 genomes] |
| rs1417296 | 1.00[ASN][1000 genomes] |
| rs1417297 | 1.00[ASN][1000 genomes] |
| rs1417299 | 1.00[ASN][1000 genomes] |
| rs17115425 | 1.00[ASN][1000 genomes] |
| rs17115551 | 1.00[ASN][1000 genomes] |
| rs17115615 | 1.00[ASN][1000 genomes] |
| rs17116652 | 1.00[ASN][1000 genomes] |
| rs17368823 | 1.00[ASN][1000 genomes] |
| rs17377380 | 1.00[ASN][1000 genomes] |
| rs2025689 | 1.00[ASN][1000 genomes] |
| rs2389776 | 1.00[ASN][1000 genomes] |
| rs2389777 | 1.00[ASN][1000 genomes] |
| rs2389785 | 1.00[ASN][1000 genomes] |
| rs4484942 | 1.00[ASN][1000 genomes] |
| rs4907006 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs4907094 | 1.00[ASN][1000 genomes] |
| rs55852981 | 1.00[ASN][1000 genomes] |
| rs57744031 | 1.00[ASN][1000 genomes] |
| rs57925971 | 1.00[ASN][1000 genomes] |
| rs58803630 | 1.00[ASN][1000 genomes] |
| rs59493945 | 1.00[ASN][1000 genomes] |
| rs59536255 | 1.00[ASN][1000 genomes] |
| rs61768760 | 0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs61770401 | 1.00[ASN][1000 genomes] |
| rs61770406 | 1.00[ASN][1000 genomes] |
| rs61770408 | 1.00[ASN][1000 genomes] |
| rs61770411 | 1.00[ASN][1000 genomes] |
| rs61770414 | 1.00[ASN][1000 genomes] |
| rs61770417 | 1.00[ASN][1000 genomes] |
| rs61770418 | 1.00[ASN][1000 genomes] |
| rs61770419 | 1.00[ASN][1000 genomes] |
| rs61770433 | 1.00[ASN][1000 genomes] |
| rs61770434 | 1.00[ASN][1000 genomes] |
| rs61770435 | 1.00[ASN][1000 genomes] |
| rs61770436 | 1.00[ASN][1000 genomes] |
| rs61770437 | 1.00[ASN][1000 genomes] |
| rs61770439 | 1.00[ASN][1000 genomes] |
| rs61770440 | 1.00[ASN][1000 genomes] |
| rs61770441 | 1.00[ASN][1000 genomes] |
| rs61770442 | 1.00[ASN][1000 genomes] |
| rs61770443 | 0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs61770444 | 0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs61770446 | 0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72718785 | 1.00[ASN][1000 genomes] |
| rs72942437 | 1.00[ASN][1000 genomes] |
| rs9659298 | 1.00[ASN][1000 genomes] |
| rs9660220 | 1.00[ASN][1000 genomes] |
| rs9660249 | 1.00[ASN][1000 genomes] |
| rs9661368 | 1.00[ASN][1000 genomes] |
| rs9661377 | 1.00[ASN][1000 genomes] |
| rs9661394 | 1.00[ASN][1000 genomes] |
| rs9728153 | 1.00[ASN][1000 genomes] |
| rs9728717 | 1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:85264000-85295600 | Weak transcription | NHEK | skin |
| 2 | chr1:85266400-85287200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 3 | chr1:85271800-85272800 | Weak transcription | GM12878-XiMat | blood |
