The 2.0 version of rSNPBase

Variant report

Variant rs1077777
Chromosome Location chr1:85244091-85244092
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85239200-85244800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr1:85240200-85245200 Weak transcription Brain Cingulate Gyrus brain
3 chr1:85240400-85244800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:85240800-85245000 Weak transcription Brain Hippocampus Middle brain
5 chr1:85240800-85246200 Weak transcription Esophagus oesophagus
6 chr1:85241000-85247600 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr1:85241000-85263600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:85241200-85244400 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:85241200-85245000 Weak transcription Brain Anterior Caudate brain
10 chr1:85241200-85245400 Weak transcription HMEC breast
11 chr1:85241600-85245000 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:85243000-85245400 Weak transcription Osteobl bone
13 chr1:85243200-85244800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:85243200-85245200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:85243800-85245400 Weak transcription Fetal Thymus thymus
16 chr1:85244000-85246800 Enhancers Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015